RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 PTPN11Q06124 597 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-203ENST00000414670 PPP3CAQ08209 521 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 ITGA7Q13683 1181 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 CASP8Q14790 479 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 PSMD6Q15008 389 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 PCBP1Q15365 356 aaKnown RBP eCLIP6.73□□□□□ -1.33
ITGB1-203ENST00000414670 TSR1Q2NL82 804 aaKnown RBP6.73□□□□□ -1.33
ITGB1-203ENST00000414670 ZNF568Q3ZCX4 644 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 CBWD6Q4V339 395 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 CBWD3Q5JTY5 395 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 CBWD5Q5RIA9 395 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 EEF1DP3Q658K8 133 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 GDF6Q6KF10 455 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-203ENST00000414670 CRELD2Q6UXH1 353 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-203ENST00000414670 CATSPER4Q7RTX7 472 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 CACNA2D4Q7Z3S7 1137 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 RSPH3Q86UC2 560 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 SERINC5Q86VE9 423 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 DNAJC5GQ8N7S2 189 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 PLEKHO2Q8TD55 490 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 SECISBP2LQ93073 1101 aaKnown RBP6.73□□□□□ -1.33
ITGB1-203ENST00000414670 GLT1D1Q96MS3 346 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 FNBP1Q96RU3 617 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 WDR24Q96S15 920 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 DNAJC7Q99615 494 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 OSMRQ99650 979 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.73□□□□□ -1.331e-13■■■■□ 20.9
ITGB1-203ENST00000414670 CDT1Q9H211 546 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 CDHR5Q9HBB8 845 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 TMEM8AQ9HCN3 771 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 PDE11AQ9HCR9 933 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 PLCB1Q9NQ66 1216 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 ABHD10Q9NUJ1 306 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 AGPAT5Q9NUQ2 364 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 RBAKQ9NYW8 714 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-203ENST00000414670 GCNT4Q9P109 453 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 ZNFX1Q9P2E3 1918 aaKnown RBP6.73□□□□□ -1.33
ITGB1-203ENST00000414670 ZSWIM8A7E2V4 1837 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 GRIN2DO15399 1336 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 DOCK5Q9H7D0 1870 aa6.73□□□□□ -1.33
ITGB1-203ENST00000414670 MCM3APO60318 1980 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 A0A1B0GUA9 196 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 TMCO5BA8MYB1 307 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 M0QZ92 97 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 EPHB6O15197 1021 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 PMM2O15305 246 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 KIF5CO60282 957 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 FAM189A1O60320 539 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 NOL4O94818 638 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 DLATP10515 647 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 MCF2P10911 925 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 ACTN1P12814 892 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 UCHL3P15374 230 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 TNNI1P19237 187 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 CRYBB1P53674 252 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 POLR2FP61218 127 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 CLDN10P78369 228 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 MRPS6P82932 125 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 SNX17Q15036 470 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 SURF1Q15526 300 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 PTGISQ16647 500 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 MAP9Q49MG5 647 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 SLC9C1Q4G0N8 1177 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 SEZ6Q53EL9 994 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 ZBTB41Q5SVQ8 909 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 KLHDC7AQ5VTJ3 777 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 KRT39Q6A163 491 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 DPY19L2P1Q6NXN4 242 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 APBB1IPQ7Z5R6 666 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 YTHDF3Q7Z739 585 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 CDR2LQ86X02 465 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 TMTC1Q8IUR5 882 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 BRSK2Q8IWQ3 736 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 THNSL1Q8IYQ7 743 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 TNS4Q8IZW8 715 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 C1orf131Q8NDD1 294 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 EHBP1Q8NDI1 1231 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 BAP1Q92560 729 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 CPB2Q96IY4 423 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 POP1Q99575 1024 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 ADPGKQ9BRR6 497 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 CELF4Q9BZC1 486 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 TMEM117Q9H0C3 514 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 INTS2Q9H0H0 1204 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 UNC93B1Q9H1C4 597 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 NUCKS1Q9H1E3 243 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 GANQ9H2C0 597 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 PDZD7Q9H5P4 517 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 CXorf56Q9H5V9 222 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 ABCB6Q9NP58 842 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 TOPORSQ9NS56 1045 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 ZNHIT6Q9NWK9 470 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 CEP72Q9P209 647 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 VPS18Q9P253 973 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 FBXL5Q9UKA1 691 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 CPSF3Q9UKF6 684 aaKnown RBP6.72□□□□□ -1.33
ITGB1-203ENST00000414670 COQ4Q9Y3A0 265 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 ADGRG1Q9Y653 693 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 LOXHD1Q8IVV2 1947 aa6.72□□□□□ -1.33
ITGB1-203ENST00000414670 A0A1W2PQ45 241 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms