RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 HOXD12P35452 270 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 HADHAP40939 763 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ASMTP46597 345 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SLC12A2P55011 1212 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ZNF280AP59817 542 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 RACK1P63244 317 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PURAQ00577 322 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 DR1Q01658 176 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ATP2B2Q01814 1243 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SOX4Q06945 474 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 KIF5AQ12840 1032 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 MAP3K12Q12852 859 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CRHR2Q13324 411 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 IFIT5Q13325 482 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SP140Q13342 867 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SERINC3Q13530 473 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 MAP7Q14244 749 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PLCL1Q15111 1095 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CLUL1Q15846 466 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CLPPQ16740 277 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 C15orf59Q2T9L4 293 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SLC9C1Q4G0N8 1177 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CCDC40Q4G0X9 1142 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CCDC38Q502W7 563 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CAVIN4Q5BKX8 364 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CCDC183Q5T5S1 534 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ANGEL2Q5VTE6 544 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PRAMEF18Q5VWM3 479 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 HGSNATQ68CP4 663 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 POMZP3Q6PJE2 187 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 C16orf86Q6ZW13 317 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 B4GALNT4Q76KP1 1039 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 HS2ST1Q7LGA3 356 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 OTOP3Q7RTS5 596 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 KDELC2Q7Z4H8 507 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SPATA21Q7Z572 469 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 DNAJB7Q7Z6W7 309 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 TTC39CQ8N584 583 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 USP38Q8NB14 1042 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 NAXEQ8NCW5 288 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 MDM1Q8TC05 714 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CCHCR1Q8TD31 782 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 POF1BQ8WVV4 589 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 HNRNPLLQ8WVV9 542 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PIBF1Q8WXW3 757 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CASP10Q92851 521 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PMEPA1Q969W9 287 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 FERMT2Q96AC1 680 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 DHX58Q96C10 678 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 RADILQ96JH8 1075 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 C16orf45Q96MC5 204 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CTAGE1Q96RT6 745 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 STRBPQ96SI9 672 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 DNAJC7Q99615 494 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PTPN18Q99952 460 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SDF4Q9BRK5 362 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 DESI2Q9BSY9 194 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 TTPALQ9BTX7 342 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 MKNK1Q9BUB5 465 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CARD11Q9BXL7 1154 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SLC26A6Q9BXS9 759 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 NACAP1Q9BZK3 213 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 TRPV6Q9H1D0 765 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 CLSTN2Q9H4D0 955 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 LRRC4CQ9HCJ2 640 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 PICK1Q9NRD5 415 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ARGLU1Q9NWB6 273 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 HPF1Q9NWY4 346 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 EMC3Q9P0I2 261 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 NFKBIL1Q9UBC1 381 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 ATPIF1Q9UII2 106 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SLC5A6Q9Y289 635 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 USP16Q9Y5T5 823 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 SNX8Q9Y5X2 465 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 NR2E3Q9Y5X4 410 aa4.28□□□□□ -1.72
LINC01048-201ENST00000414480 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 LAMA2P24043 3122 aaKnown RBP4.28□□□□□ -1.72
LINC01048-201ENST00000414480 COL2A1P02458 1487 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 FSD2A1L4K1 749 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 CCDC69A6NI79 296 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 NDUFAB1O14561 156 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 THAP12O43422 761 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 KCNQ3O43525 872 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 MGEA5O60502 916 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 PLOD3O60568 738 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 ASMTLO95671 621 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 DLGAP3O95886 979 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 MT-ND3P03897 115 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 PYGLP06737 847 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 C6orf222P0C671 652 aaPredicted RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 RPS12P25398 132 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 PSMA4P25789 261 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 POLR2BP30876 1174 aaKnown RBP4.27□□□□□ -1.73
LINC01048-201ENST00000414480 GALNSP34059 522 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 HSD17B2P37059 387 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 HTR3AP46098 478 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 VPS41P49754 854 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 SULT1E1P49888 294 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 PEX5P50542 639 aa4.27□□□□□ -1.73
LINC01048-201ENST00000414480 KRT83P78385 493 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms