RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 EXOC7Q9UPT5 735 aa10.99□□□□□ -0.65
TMEM248-202ENST00000413593 PLXNA4Q9HCM2 1894 aa10.99□□□□□ -0.65
TMEM248-202ENST00000413593 BRWD1Q9NSI6 2320 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 TTC28Q96AY4 2481 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.98□□□□□ -0.65
TMEM248-202ENST00000413593 PVALEFA0A1B0GWK0 134 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 TTC26A0AVF1 554 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 TMEM189-UBE2V1I3L0A0 370 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 LILRB3O75022 631 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 CLASP2O75122 1294 aaKnown RBP10.98□□□□□ -0.65
TMEM248-202ENST00000413593 TADA2AO75478 443 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 PRPF6O94906 941 aaKnown RBP10.98□□□□□ -0.65
TMEM248-202ENST00000413593 URODP06132 367 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 IGFBP6P24592 240 aaPredicted RBP10.98□□□□□ -0.65
TMEM248-202ENST00000413593 SYKP43405 635 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 GLUD2P49448 558 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 NDUFV1P49821 464 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 CLCNKBP51801 687 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 NDUFA8P51970 172 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 DSG1Q02413 1049 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 EHHADHQ08426 723 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 ENOX2Q16206 610 aaKnown RBP10.98□□□□□ -0.65
TMEM248-202ENST00000413593 FAM26FQ5R3K3 315 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 KIAA0319Q5VV43 1072 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 TMEM184AQ6ZMB5 413 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 STXBP4Q6ZWJ1 553 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 GLIS3Q8NEA6 775 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 HASPINQ8TF76 798 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 MSLNLQ96KJ4 702 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 UROC1Q96N76 676 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 GOLPH3LQ9H4A5 285 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 MRPL17Q9NRX2 175 aaKnown RBP10.98□□□□□ -0.65
TMEM248-202ENST00000413593 CHST7Q9NS84 486 aa10.98□□□□□ -0.65
TMEM248-202ENST00000413593 CPSF3Q9UKF6 684 aaKnown RBP10.98□□□□□ -0.65
TMEM248-202ENST00000413593 BARX2Q9UMQ3 279 aaPredicted RBP10.98□□□□□ -0.65
TMEM248-202ENST00000413593 SF3B1O75533 1304 aaKnown RBP eCLIP10.98□□□□□ -0.65
TMEM248-202ENST00000413593 LACTBL1A8MY62 500 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 C2CD2LO14523 706 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 B3GAT3O94766 335 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 ADRB2P07550 413 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 CNPP09543 421 aaKnown RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 HOXD13P35453 343 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 ANP32AP39687 249 aaKnown RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 PPP2R3AQ06190 1150 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 ELAVL2Q12926 359 aaKnown RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 POSTNQ15063 836 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 CLUL1Q15846 466 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 UPP1Q16831 310 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 USP41Q3LFD5 358 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 PUS10Q3MIT2 529 aaKnown RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 TPRNQ4KMQ1 711 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 PTCRAQ6ISU1 281 aaPredicted RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 KIAA1841Q6NSI8 718 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 LLGL2Q6P1M3 1020 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 DCLRE1AQ6PJP8 1040 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 CD300LGQ6UXG3 332 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 EPM2AIP1Q7L775 607 aaPredicted RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 GPR65Q8IYL9 337 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 SYCP3Q8IZU3 236 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 TMEM87AQ8NBN3 555 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 C3orf58Q8NDZ4 430 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 ADAMTS19Q8TE59 1207 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 POMGNT1Q8WZA1 660 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 C18orf25Q96B23 403 aaPredicted RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 B3GALT6Q96L58 329 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 KLHL5Q96PQ7 755 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 COL25A1Q9BXS0 654 aaPredicted RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 TMEM206Q9H813 350 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 RPF1Q9H9Y2 349 aaKnown RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 CD207Q9UJ71 328 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 AGO2Q9UKV8 859 aaKnown RBP10.97□□□□□ -0.65
TMEM248-202ENST00000413593 SSX2IPQ9Y2D8 614 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 HCFC2Q9Y5Z7 792 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 REV3LO60673 3130 aa10.97□□□□□ -0.65
TMEM248-202ENST00000413593 ATG2AQ2TAZ0 1938 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 GRXCR2A6NFK2 248 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 PODXLO00592 558 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 EIF3DO15371 548 aaKnown RBP eCLIP10.96□□□□□ -0.65
TMEM248-202ENST00000413593 KLRC4O43908 158 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 MYL1P05976 194 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 SRGAP2BP0DMP2 458 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 IL9P15248 144 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 GARTP22102 1010 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 RPL9P32969 192 aaKnown RBP10.96□□□□□ -0.65
TMEM248-202ENST00000413593 ACOT2P49753 483 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 POU5F1Q01860 360 aaKnown RBP10.96□□□□□ -0.65
TMEM248-202ENST00000413593 SPAG1Q07617 926 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 SMAD4Q13485 552 aaKnown RBP10.96□□□□□ -0.65
TMEM248-202ENST00000413593 ZBTB6Q15916 424 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 RTP2Q5QGT7 225 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 FAM171A1Q5VUB5 890 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 CRELD2Q6UXH1 353 aaPredicted RBP10.96□□□□□ -0.65
TMEM248-202ENST00000413593 KRBA2Q6ZNG9 492 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 CD302Q8IX05 232 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 SMRP1Q8NCR6 262 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 ZNF507Q8TCN5 953 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 SLC22A17Q8WUG5 538 aa10.96□□□□□ -0.65
TMEM248-202ENST00000413593 RIN2Q8WYP3 895 aaPredicted RBP10.96□□□□□ -0.65
TMEM248-202ENST00000413593 CASP10Q92851 521 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms