RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 UROC1Q96N76 676 aa16.07■□□□□ 0.16
SUMO1-207ENST00000409498 NUP62CLQ9H1M0 184 aa16.07■□□□□ 0.16
SUMO1-207ENST00000409498 PCIF1Q9H4Z3 704 aa16.07■□□□□ 0.16
SUMO1-207ENST00000409498 STK39Q9UEW8 545 aa16.07■□□□□ 0.16
SUMO1-207ENST00000409498 MTUS1Q9ULD2 1270 aa16.07■□□□□ 0.16
SUMO1-207ENST00000409498 C2CD2Q9Y426 696 aa16.07■□□□□ 0.16
SUMO1-207ENST00000409498 COL4A4P53420 1690 aaPredicted RBP16.07■□□□□ 0.16
SUMO1-207ENST00000409498 PLXNA4Q9HCM2 1894 aa16.07■□□□□ 0.16
SUMO1-207ENST00000409498 MYO9BQ13459 2157 aa16.07■□□□□ 0.16
SUMO1-207ENST00000409498 RFXAPO00287 272 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 CLIC2O15247 247 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 CALUO43852 315 aaPredicted RBP16.06■□□□□ 0.16
SUMO1-207ENST00000409498 LRPAP1P30533 357 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 RPL9P32969 192 aaKnown RBP16.06■□□□□ 0.16
SUMO1-207ENST00000409498 CAMK1Q14012 370 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 ADGRE1Q14246 886 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 SURF1Q15526 300 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 EDRF1Q3B7T1 1238 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 GLRA4Q5JXX5 417 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 SMYD4Q8IYR2 804 aaPredicted RBP16.06■□□□□ 0.16
SUMO1-207ENST00000409498 DDX27Q96GQ7 796 aaKnown RBP16.06■□□□□ 0.16
SUMO1-207ENST00000409498 FAM161BQ96MY7 647 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 FAM213AQ9BRX8 229 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 COLEC11Q9BWP8 271 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 MARCH5Q9NX47 278 aa16.06■□□□□ 0.16
SUMO1-207ENST00000409498 UBQLN1Q9UMX0 589 aaKnown RBP16.06■□□□□ 0.16
SUMO1-207ENST00000409498 ZNF233A6NK53 670 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 PPP1R3GB7ZBB8 358 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 NT5C1B-RDH14C9J2C7 533 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 MAPK13O15264 365 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 GRM6O15303 877 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 XPOTO43592 962 aaKnown RBP16.05■□□□□ 0.16
SUMO1-207ENST00000409498 PBX3P40426 434 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 KRT17Q04695 432 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 SOX4Q06945 474 aaPredicted RBP16.05■□□□□ 0.16
SUMO1-207ENST00000409498 UPP1Q16831 310 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 SPATA1Q5VX52 437 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 DDX53Q86TM3 631 aaKnown RBP16.05■□□□□ 0.16
SUMO1-207ENST00000409498 TMEM173Q86WV6 379 aaPredicted RBP16.05■□□□□ 0.16
SUMO1-207ENST00000409498 ZC3H3Q8IXZ2 948 aaKnown RBP16.05■□□□□ 0.16
SUMO1-207ENST00000409498 GDPD5Q8WTR4 605 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 TMEM169Q96HH4 297 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 DHTKD1Q96HY7 919 aaPredicted RBP16.05■□□□□ 0.16
SUMO1-207ENST00000409498 MFSD14AQ96MC6 490 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 GAS2L1Q99501 681 aaPredicted RBP16.05■□□□□ 0.16
SUMO1-207ENST00000409498 MAPK8IP1Q9UQF2 711 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 MTCH2Q9Y6C9 303 aa16.05■□□□□ 0.16
SUMO1-207ENST00000409498 CHD7Q9P2D1 2997 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 GOLGA8IPA6NC78 632 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 GOLGA8JA6NMD2 632 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 FSCN2O14926 492 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 NR3C1P04150 777 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
SUMO1-207ENST00000409498 DNAJB1P25685 340 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 OR1G1P47890 313 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 ENPEPQ07075 957 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 SNRNP35Q16560 246 aaKnown RBP16.04■□□□□ 0.16
SUMO1-207ENST00000409498 PTPROQ16827 1216 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 PDE12Q6L8Q7 609 aaKnown RBP16.04■□□□□ 0.16
SUMO1-207ENST00000409498 DCLRE1AQ6PJP8 1040 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 CD300LGQ6UXG3 332 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 CBWD2Q8IUF1 395 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 BCL7CQ8WUZ0 217 aaPredicted RBP16.04■□□□□ 0.16
SUMO1-207ENST00000409498 POF1BQ8WVV4 589 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 MRPL38Q96DV4 380 aaKnown RBP16.04■□□□□ 0.16
SUMO1-207ENST00000409498 KIF12Q96FN5 646 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 PAAF1Q9BRP4 392 aa16.04■□□□□ 0.16
SUMO1-207ENST00000409498 ALG13Q9NP73 1137 aaKnown RBP16.04■□□□□ 0.16
SUMO1-207ENST00000409498 RBAKQ9NYW8 714 aaPredicted RBP16.04■□□□□ 0.16
SUMO1-207ENST00000409498 PUF60Q9UHX1 559 aaKnown RBP16.04■□□□□ 0.16
SUMO1-207ENST00000409498 CDH23Q9H251 3354 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 CASTOR2A6NHX0 329 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 EXOC3O60645 756 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 PTMSP20962 102 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 CCNE1P24864 410 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 RPL13P26373 211 aaKnown RBP16.03■□□□□ 0.16
SUMO1-207ENST00000409498 CYP2J2P51589 502 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 CLCNKBP51801 687 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 WNT7BP56706 349 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 LRRC63Q05C16 580 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 STIM1Q13586 685 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 PSMD6Q15008 389 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 JADE1Q6IE81 842 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 EFCAB13Q8IY85 973 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 GPR65Q8IYL9 337 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 MYLIPQ8WY64 445 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 VN1R3Q9BXE9 311 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 ADAM28Q9UKQ2 775 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 IRAK3Q9Y616 596 aa16.03■□□□□ 0.16
SUMO1-207ENST00000409498 ATG2AQ2TAZ0 1938 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 ANO9A1A5B4 782 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 PSMA7O14818 248 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 NFICP08651 508 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 PAX3P23760 479 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 CLDN10P78369 228 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 SPAG1Q07617 926 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 CYP24A1Q07973 514 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 TMEM132DQ14C87 1099 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 ISM2Q6H9L7 571 aa16.02■□□□□ 0.16
SUMO1-207ENST00000409498 BEST2Q8NFU1 509 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms