RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ANGEL2Q5VTE6 544 aaKnown RBP16.48■□□□□ 0.23
LIMS2-205ENST00000409455 PRAMEF18Q5VWM3 479 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 SLFN12Q8IYM2 578 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 SYT2Q8N9I0 419 aaPredicted RBP16.48■□□□□ 0.23
LIMS2-205ENST00000409455 ERMNQ8TAM6 284 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 TRPM4Q8TD43 1214 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 INPP5DQ92835 1189 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 LRRC37BQ96QE4 947 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 GPR88Q9GZN0 384 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 WNT8AQ9H1J5 351 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 GPRC5DQ9NZD1 345 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 APEX2Q9UBZ4 518 aa16.48■□□□□ 0.23
LIMS2-205ENST00000409455 TULP1O00294 542 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-205ENST00000409455 UPP2O95045 317 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 EYA4O95677 639 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 TTC4O95801 387 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 ACADSP16219 412 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 COMTP21964 271 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 TARSP26639 723 aaKnown RBP16.47■□□□□ 0.23
LIMS2-205ENST00000409455 KCNJ1P48048 391 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 IL9RQ01113 521 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 KLC1Q07866 573 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 LBRQ14739 615 aaKnown RBP16.47■□□□□ 0.23
LIMS2-205ENST00000409455 SGSM1Q2NKQ1 1148 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 CWF19L1Q69YN2 538 aaKnown RBP16.47■□□□□ 0.23
LIMS2-205ENST00000409455 CATSPER3Q86XQ3 398 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 SLC13A5Q86YT5 568 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-205ENST00000409455 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.47■□□□□ 0.23
LIMS2-205ENST00000409455 GPC2Q8N158 579 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 TMEM237Q96Q45 408 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 MEIS1O00470 390 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 THAP12O43422 761 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 PYGMP11217 842 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 TAL1P17542 331 aaPredicted RBP16.47■□□□□ 0.23
LIMS2-205ENST00000409455 PEX5P50542 639 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 RASSF2P50749 326 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 MESDQ14696 234 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 ARHGAP44Q17R89 818 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 FAM47EQ6ZV65 393 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 FBXO11Q86XK2 927 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 SRRM1Q8IYB3 904 aaKnown RBP16.47■□□□□ 0.23
LIMS2-205ENST00000409455 ENDOVQ8N8Q3 282 aaKnown RBP16.47■□□□□ 0.23
LIMS2-205ENST00000409455 FAM13CQ8NE31 585 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 BORCS6Q96GS4 357 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 SYT17Q9BSW7 474 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 AAASQ9NRG9 546 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 ASIC3Q9UHC3 531 aa16.47■□□□□ 0.23
LIMS2-205ENST00000409455 TCRBV7S2A1N4TA0A589 114 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 FOXO6A8MYZ6 492 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 FTLP02792 175 aaPredicted RBP16.46■□□□□ 0.23
LIMS2-205ENST00000409455 TAC1P20366 129 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 CNGA1P29973 690 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 YARSP54577 528 aaKnown RBP16.46■□□□□ 0.23
LIMS2-205ENST00000409455 PSMC6P62333 389 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 RNF207Q6ZRF8 634 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 ASAP3Q8TDY4 903 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 MORC4Q8TE76 937 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 TEKT4Q8WW24 435 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 AGPAT1Q99943 283 aa16.46■□□□□ 0.23
LIMS2-205ENST00000409455 INTS2Q9H0H0 1204 aaKnown RBP16.46■□□□□ 0.23
LIMS2-205ENST00000409455 LRRN2O75325 713 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 PTDSS1P48651 473 aaKnown RBP16.46■□□□□ 0.22
LIMS2-205ENST00000409455 GPC5P78333 572 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 KRT17Q04695 432 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 KCNA1Q09470 495 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 TRAF1Q13077 416 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 KIF22Q14807 665 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 C12orf50Q8NA57 414 aaPredicted RBP16.46■□□□□ 0.22
LIMS2-205ENST00000409455 DNAJC9Q8WXX5 260 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 ZNF341Q9BYN7 854 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 TBK1Q9UHD2 729 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 HAO1Q9UJM8 370 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 USH1CQ9Y6N9 552 aa16.46■□□□□ 0.22
LIMS2-205ENST00000409455 RSPH10B2B2RC85 870 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 MEIS2O14770 477 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 MAPK13O15264 365 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 SPOPO43791 374 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 CDH16O75309 829 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 TCEA3O75764 348 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 DCTN3O75935 186 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 RSPH10BP0C881 870 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 ITIH2P19823 946 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 ALDH3A1P30838 453 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 HIRAP54198 1017 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-205ENST00000409455 MUM1Q2TAK8 710 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 WASHC2DQ5SRD0 308 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 APBB1IPQ7Z5R6 666 aaPredicted RBP16.45■□□□□ 0.22
LIMS2-205ENST00000409455 VCXQ9H320 206 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 STARD13Q9Y3M8 1113 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 SPDYE5A6NIY4 337 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 CHKAP35790 457 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 ADCY1Q08828 1119 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 TCEAL1Q15170 157 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 TMEM154Q6P9G4 183 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 ANKRD35Q8N283 1001 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 SNF8Q96H20 258 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 PAIP2Q9BPZ3 127 aaKnown RBP16.45■□□□□ 0.22
LIMS2-205ENST00000409455 LRRC19Q9H756 370 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 LGALS13Q9UHV8 139 aa16.45■□□□□ 0.22
LIMS2-205ENST00000409455 ACTL7BQ9Y614 415 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms