RNA–Protein interactions for RNA: ENST00000409406.1

RBM4-205, Transcript of RNA binding motif protein 4, human

APPRIS P1 TSL 2 BASIC

Gene RBM4, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-205	ENST00000409406	CFAP58	Q5T655	872 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	IQSEC1	Q6DN90	963 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	GJB7	Q6PEY0	223 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	CCDC170	Q8IYT3	715 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	SPATA4	Q8NEY3	305 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	ZNF483	Q8TF39	744 aa	Predicted RBP	13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	POMGNT1	Q8WZA1	660 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	SYN2	Q92777	582 aa	Predicted RBP	13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	SLC5A4	Q9NY91	659 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	FBXL5	Q9UKA1	691 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	ZSWIM8	A7E2V4	1837 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	TTLL13P	A6NNM8	815 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	LRRN2	O75325	713 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	IGHA2	P01877	340 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	INSRR	P14616	1297 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	ABCD1	P33897	745 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	IFFO1	Q0D2I5	559 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	LAMTOR4	Q0VGL1	99 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	ASTE1	Q2TB18	679 aa	Predicted RBP	13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	ANKRD20A8P	Q5CZ79	823 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	TMEM134	Q9H6X4	195 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	ZFYVE28	Q9HCC9	887 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	AIPL1	Q9NZN9	384 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	DNM1L	O00429	736 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	GAS2	O43903	313 aa	Known RBP	13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	SKAP2	O75563	359 aa	Predicted RBP	13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	C22orf31	O95567	290 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	GJB1	P08034	283 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	RPSA	P08865	295 aa	Known RBP	13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	CYLC1	P35663	651 aa	Predicted RBP	13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	SFMBT2	Q5VUG0	894 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	IQCK	Q8N0W5	287 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	MAB21L3	Q8N8X9	362 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	SMC1B	Q8NDV3	1235 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	PARD3B	Q8TEW8	1205 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	PSPC1	Q8WXF1	523 aa	Known RBP	13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	BICD1	Q96G01	975 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	ZBTB45	Q96K62	511 aa	Predicted RBP	13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	MFSD14A	Q96MC6	490 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	OSBPL7	Q9BZF2	842 aa		13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	NUCKS1	Q9H1E3	243 aa	Known RBP	13.81	□□□□□ -0.2
RBM4-205	ENST00000409406	MACROD2	A1Z1Q3	448 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	MMP3	P08254	477 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	GCK	P35557	465 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	EIF4A3	P38919	411 aa	Known RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	MATR3	P43243	847 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	2e-9	■■■□□ 16.9
RBM4-205	ENST00000409406	GCLM	P48507	274 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	LIG4	P49917	911 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	JAM2	P57087	298 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	MYL7	Q01449	175 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	CYP27A1	Q02318	531 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	SREBF2	Q12772	1141 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	STRN3	Q13033	797 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	EFCAB12	Q6NXP0	572 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	CD302	Q8IX05	232 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	ARMC2	Q8NEN0	867 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	TCP11	Q8WWU5	503 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	HHIPL1	Q96JK4	782 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	CCDC42	Q96M95	316 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	TARS2	Q9BW92	718 aa	Known RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	TMEM117	Q9H0C3	514 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	CCDC113	Q9H0I3	377 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	GNE	Q9Y223	722 aa	Known RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	TMEM88B	A6NKF7	163 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406		H3BRB1	525 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	MSC	O60682	206 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	LCA5L	O95447	670 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	SRGAP2C	P0DJJ0	459 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	CYP2B6	P20813	491 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	CLCN3	P51790	818 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	TNFAIP2	Q03169	654 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	RAPGEF1	Q13905	1077 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	MXD4	Q14582	209 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	IRF2BP2	Q7Z5L9	587 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	EXOC8	Q8IYI6	725 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	GPD1L	Q8N335	351 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	RNF149	Q8NC42	400 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	OR6J1	Q8NGC5	347 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	RSRC1	Q96IZ7	334 aa	Known RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	ATP6V1G3	Q96LB4	118 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	POP1	Q99575	1024 aa	Known RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	INTS2	Q9H0H0	1204 aa	Known RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	TUT1	Q9H6E5	874 aa	Known RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	DUSP10	Q9Y6W6	482 aa		13.8	□□□□□ -0.2
RBM4-205	ENST00000409406	EME2	A4GXA9	379 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	CA12	O43570	354 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	KIF11	P52732	1056 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	IGBP1	P78318	339 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	CYP24A1	Q07973	514 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	XRCC4	Q13426	336 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	EPC2	Q52LR7	807 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	ZNF484	Q5JVG2	852 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	OLFML2B	Q68BL8	750 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	CYP4F22	Q6NT55	531 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	LINC01465	Q8N7H1	131 aa		13.79	□□□□□ -0.2
RBM4-205	ENST00000409406	PIK3R5	Q8WYR1	880 aa		13.79	□□□□□ -0.2

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