RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 COL1A2P08123 1366 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 PTPRFP10586 1907 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 TARSL2A2RTX5 802 aaKnown RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 GRID2IPA4D2P6 1211 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 RRN3P2A6NIE6 340 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 H3BRB1 525 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 INO80B-WBP1J3KQ70 363 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 ZNF185O15231 689 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 CYP26A1O43174 497 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 PHACTR2O75167 634 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 SGPL1O95470 568 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 C22orf31O95567 290 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 HLA-DRAP01903 254 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 FTLP02792 175 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 HOXC6P09630 235 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 HOXD8P13378 290 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 ZSCAN20P17040 1043 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 TBXAS1P24557 533 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 PHKA2P46019 1235 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 HADHBP55084 474 aaKnown RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 GPC5P78333 572 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 CDR2Q01850 454 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 DGKDQ16760 1214 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 KYAT1Q16773 422 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 FAM187BQ17R55 369 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 DUOXA2Q1HG44 320 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 GLE1Q53GS7 698 aaKnown RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 TMEM63BQ5T3F8 832 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 ATF7IP2Q5U623 682 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 WDR93Q6P2C0 686 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 MPZL3Q6UWV2 235 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 PEX26Q7Z412 305 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 ZNF677Q86XU0 584 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 IFNLR1Q8IU57 520 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 WDR49Q8IV35 697 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 BRSK2Q8IWQ3 736 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 RPUSD2Q8IZ73 545 aaKnown RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 MMGT1Q8N4V1 131 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 LRRC57Q8N9N7 239 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 SPATA4Q8NEY3 305 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 SLC35G2Q8TBE7 412 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 COG1Q8WTW3 980 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 KAT5Q92993 513 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 C16orf70Q9BSU1 422 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 ZBED2Q9BTP6 218 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 IMPG2Q9BZV3 1241 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 INO80BQ9C086 356 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 TUT1Q9H6E5 874 aaKnown RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 ANKZF1Q9H8Y5 726 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 PTPRHQ9HD43 1115 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 TOPORSQ9NS56 1045 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 PRMT7Q9NVM4 692 aaPredicted RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 OGFRQ9NZT2 677 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 NOCTQ9UK39 431 aaKnown RBP6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 TNFSF13BQ9Y275 285 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 PCDHB2Q9Y5E7 798 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 CNTNAP2Q9UHC6 1331 aa6.74□□□□□ -1.33
GTF3C3-202ENST00000409364 TMCO5BA8MYB1 307 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 PDE2AO00408 941 aaPredicted RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 KIF4AO95239 1232 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 FTCDO95954 541 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 RHOXF2BP0C7M4 288 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 KRT5P13647 590 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CYP11B1P15538 503 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 SMPD1P17405 629 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 PROZP22891 400 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 PIK3CAP42336 1068 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 PDE6CP51160 858 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CLCN3P51790 818 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 IGBP1P78318 339 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 TNFAIP2Q03169 654 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 MAP2K5Q13163 448 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 SGSM1Q2NKQ1 1148 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 MORN1Q5T089 497 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 TDRD10Q5VZ19 366 aaKnown RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 PPP1R2P3Q6NXS1 205 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 NFRKBQ6P4R8 1299 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 MTHFD1LQ6UB35 978 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 PAXIP1Q6ZW49 1069 aaPredicted RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 ZBTB33Q86T24 672 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 DAAM2Q86T65 1068 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 NOA1Q8NC60 698 aaKnown RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 OLIG1Q8TAK6 271 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 EPS8L1Q8TE68 723 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 TRAPPC12Q8WVT3 735 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 RUBCNQ92622 972 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 NLRP4Q96MN2 994 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 RHOXF2Q9BQY4 288 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 EPC1Q9H2F5 836 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CPA4Q9UI42 421 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CPSF3Q9UKF6 684 aaKnown RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 AMFRQ9UKV5 643 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 ZHX1Q9UKY1 873 aaPredicted RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 MYH11P35749 1972 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 OTOFQ9HC10 1997 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 NCANO14594 1321 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 KIAA1217Q5T5P2 1943 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 A6NJR5 290 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 ABLIM1O14639 778 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms