RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 PTTG2Q9NZH5 202 aa11.34□□□□□ -0.59
NIF3L1-204ENST00000409357 PCYOX1Q9UHG3 505 aa11.34□□□□□ -0.59
NIF3L1-204ENST00000409357 LGALS13Q9UHV8 139 aa11.34□□□□□ -0.59
NIF3L1-204ENST00000409357 PAIP2BQ9ULR5 123 aaKnown RBP11.34□□□□□ -0.59
NIF3L1-204ENST00000409357 NR2E3Q9Y5X4 410 aa11.34□□□□□ -0.59
NIF3L1-204ENST00000409357 MYH4Q9Y623 1939 aa11.34□□□□□ -0.59
NIF3L1-204ENST00000409357 A0A087X0T9 212 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 CCL15-CCL14A0A0B4J2E2 113 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 RBM47A0AV96 593 aaKnown RBP11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 TESPA1A2RU30 521 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 F8W8V4 182 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 GPR25O00155 361 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 DDAH1O94760 285 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 ITGA2BP08514 1039 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 FAM228BP0C875 321 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 T-ENOLP0DO92 83 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 ALAS1P13196 640 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 RGS2P41220 211 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 ACADVLP49748 655 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 DR1Q01658 176 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 HNRNPDQ14103 355 aaKnown RBP11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 SPIDRQ14159 915 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 CCL15Q16663 113 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 SLC45A4Q5BKX6 768 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 CGB2Q6NT52 195 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 LRRC74BQ6ZQY2 392 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 MARK2Q7KZI7 788 aaKnown RBP11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 NT5DC3Q86UY8 548 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 ERO1BQ86YB8 467 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 PASD1Q8IV76 773 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 CEP63Q96MT8 703 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 LRRC4CQ9HCJ2 640 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 ZDHHC7Q9NXF8 308 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 GRHL1Q9NZI5 618 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 TRIM33Q9UPN9 1127 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 SH3GLB1Q9Y371 365 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 UMODL1Q5DID0 1318 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 TMEM120BA0PK00 339 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 MAP3K7O43318 606 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 AP1G1O43747 822 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 UPP2O95045 317 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 LDHCP07864 332 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 CHRNA3P32297 505 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 UBA7P41226 1012 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 NT5C2P49902 561 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 MAPK7Q13164 816 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 MOGSQ13724 837 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 RRP1BQ14684 758 aaKnown RBP11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 KBTBD12Q3ZCT8 623 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 GALNT17Q6IS24 598 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 CCDC174Q6PII3 467 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 LRRC55Q6ZSA7 311 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 CCDC80Q76M96 950 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 PEX26Q7Z412 305 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 ADGRG6Q86SQ4 1221 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 ZNF554Q86TJ5 538 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 MAPKAPK5Q8IW41 473 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 MAGEB6Q8N7X4 407 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 DIS3LQ8TF46 1054 aaKnown RBP11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 C17orf50Q8WW18 174 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 CFHR5Q9BXR6 569 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 AP1M1Q9BXS5 423 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 UBA5Q9GZZ9 404 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 ZCWPW1Q9H0M4 648 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 NAPBQ9H115 298 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 MYLK2Q9H1R3 596 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 OCEL1Q9H607 264 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 TIMMDC1Q9NPL8 285 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 TUBGCP4Q9UGJ1 667 aa11.33□□□□□ -0.6
NIF3L1-204ENST00000409357 FLT1P17948 1338 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 ADGRA3Q8IWK6 1321 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 NAV1Q8NEY1 1877 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 PFDN1O60925 122 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 TTLL1O95922 423 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 TAC1P20366 129 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 MUTP22033 750 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 CYP7A1P22680 504 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 PTGIRP43119 386 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 IFNAR2P48551 515 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 CD97P48960 835 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 BPIFB4P59827 614 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 USP46P62068 366 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 XIAPP98170 497 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 IL9RQ01113 521 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 MAP3K10Q02779 954 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 KLHL30Q0D2K2 578 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 STK4Q13043 487 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 PPIL2Q13356 520 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 MPP3Q13368 585 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 GRM2Q14416 872 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 CCDC6Q16204 474 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 ASIC2Q16515 512 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 SHROOM1Q2M3G4 852 aaPredicted RBP11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 FAM91A1Q658Y4 838 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 PHLDB3Q6NSJ2 640 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 CCNJLQ8IV13 435 aa11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 ST13P4Q8IZP2 240 aaPredicted RBP11.32□□□□□ -0.6
NIF3L1-204ENST00000409357 RIBC1Q8N443 379 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms