RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 IFT74Q96LB3 600 aa10.6□□□□□ -0.71
NIF3L1-202ENST00000409020 POP1Q99575 1024 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-202ENST00000409020 HERC2P3Q9BVR0 1158 aa10.6□□□□□ -0.71
NIF3L1-202ENST00000409020 RAB34Q9BZG1 259 aa10.6□□□□□ -0.71
NIF3L1-202ENST00000409020 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
NIF3L1-202ENST00000409020 SUDS3Q9H7L9 328 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-202ENST00000409020 JRKLQ9Y4A0 524 aa10.6□□□□□ -0.71
NIF3L1-202ENST00000409020 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.6□□□□□ -0.71
NIF3L1-202ENST00000409020 NUB1Q9Y5A7 615 aa10.6□□□□□ -0.71
NIF3L1-202ENST00000409020 TECTAO75443 2155 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 H0YHG0 523 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 N4BP3O15049 544 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 SLC16A4O15374 487 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 TEX28O15482 410 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 KIF4AO95239 1232 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 SPATA31D3P0C874 917 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 SRGAP2BP0DMP2 458 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 RPL17P18621 184 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 OSTNP61366 133 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 SARNPP82979 210 aaKnown RBP10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 GRIK3Q13003 919 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 MYBPC2Q14324 1141 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 HERC4Q5GLZ8 1057 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 HYIQ5T013 277 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 ATF7IP2Q5U623 682 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 SPATA31D4Q6ZUB0 917 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 ERCC4Q92889 916 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 RPS6KC1Q96S38 1066 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 ADAM7Q9H2U9 754 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 SMOC2Q9H3U7 446 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 GOLGA2P5Q9HBQ8 144 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 ARHGAP28Q9P2N2 729 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 CLIC4Q9Y696 253 aa10.59□□□□□ -0.71
NIF3L1-202ENST00000409020 C2CD4DB7Z1M9 353 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 ABLIM1O14639 778 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 URODP06132 367 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 TPM3P06753 285 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 PLA2G4BP0C869 781 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 ALADP13716 330 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 HOXB8P17481 243 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 KLRC2P26717 231 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 PPP2R5AQ15172 486 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 SF3A1Q15459 793 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 SPECC1Q5M775 1068 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 RTP2Q5QGT7 225 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 FUT10Q6P4F1 479 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 ZBTB33Q86T24 672 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 CABP7Q86V35 215 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 GLYCTKQ8IVS8 523 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 SUGP1Q8IWZ8 645 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 HACE1Q8IYU2 909 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 TMEM87AQ8NBN3 555 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 ZBTB45Q96K62 511 aaPredicted RBP10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 FBXL18Q96ME1 805 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 ACO2Q99798 780 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 TARS2Q9BW92 718 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 CDT1Q9H211 546 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 PTPRHQ9HD43 1115 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 MRPL17Q9NRX2 175 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 CHST7Q9NS84 486 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 ZDBF2Q9HCK1 2354 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 TDRD15B5MCY1 1934 aaKnown RBP10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 PHLPP2Q6ZVD8 1323 aa10.58□□□□□ -0.72
NIF3L1-202ENST00000409020 K7ERI5 159 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 RFPL2O75678 378 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 GLUD2P49448 558 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 EFNA5P52803 228 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 DSG1Q02413 1049 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 RESTQ13127 1097 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 DMP1Q13316 513 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 TUSC3Q13454 348 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 DHX8Q14562 1220 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 KARSQ15046 597 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 ZRSR2Q15696 482 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 SEZ6Q53EL9 994 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 PRSS55Q6UWB4 352 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 HFE2Q6ZVN8 426 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 GAS2L3Q86XJ1 694 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 KRT222Q8N1A0 295 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 SDR16C5Q8N3Y7 309 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 SYT2Q8N9I0 419 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 EMILIN2Q9BXX0 1053 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 HAPLN2Q9GZV7 340 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 KMT5AQ9NQR1 393 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 ADAM28Q9UKQ2 775 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 PLXNA3P51805 1871 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 PRR33A8MZF0 331 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 CTIFO43310 598 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 HARSP12081 509 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 SYT1P21579 422 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 PROZP22891 400 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 CEBPZQ03701 1054 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 SOX4Q06945 474 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 GIT2Q14161 759 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 BMS1Q14692 1282 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 ZNF568Q3ZCX4 644 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 ARL6IP4Q66PJ3 421 aaKnown RBP10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 CD300LGQ6UXG3 332 aa10.57□□□□□ -0.72
NIF3L1-202ENST00000409020 PALB2Q86YC2 1186 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms