RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PHOX2BQ99453 314 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 LXNQ9BS40 222 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 KCNH6Q9H252 994 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 ANKEF1Q9NU02 776 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 TRIM10Q9UDY6 481 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 PCDHA10Q9Y5I2 948 aa13.95□□□□□ -0.18
SMARCB1-203ENST00000407082 GRID2IPA4D2P6 1211 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 CES2O00748 559 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 BACH1O14867 736 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 EPHB6O15197 1021 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 P4HA2O15460 535 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 GJB5O95377 273 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 ABL1P00519 1130 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 LGALS2P05162 132 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 PSAPP07602 524 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 ZNF286BP0CG31 522 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 UCHL3P15374 230 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 SCP2P22307 547 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 DMTNQ08495 405 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 CFAP221Q4G0U5 840 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 HSP90B2PQ58FF3 399 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 DCAF17Q5H9S7 520 aaPredicted RBP13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 SWSAP1Q6NVH7 229 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 CNKSR3Q6P9H4 555 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 LRRC8DQ7L1W4 858 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 C12orf56Q8IXR9 622 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 TAF4BQ92750 862 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 GLG1Q92896 1179 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 C17orf80Q9BSJ5 609 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 FGFBP2Q9BYJ0 223 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 ST6GALNAC4Q9H4F1 302 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 AZI2Q9H6S1 392 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 VIPAS39Q9H9C1 493 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 FAM50BQ9Y247 325 aa13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 TRIP12Q14669 1992 aaPredicted RBP13.94□□□□□ -0.18
SMARCB1-203ENST00000407082 IGKV6D-21A0A0A0MT36 114 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 RCCD1A6NED2 376 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 H3BRB1 525 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 ENC1O14682 589 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 MAP2K7O14733 419 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 ZNF263O14978 683 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 AKAP3O75969 853 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 MOCS3O95396 460 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 PLEKP08567 350 aaPredicted RBP13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 RHOXF2BP0C7M4 288 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 SELPP16109 830 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 PON1P27169 355 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 STAT5BP51692 787 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 CASP5P51878 434 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 PTPN11Q06124 597 aaPredicted RBP13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 IKBKEQ14164 716 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 SMC1AQ14683 1233 aaKnown RBP13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 PTPROQ16827 1216 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 BEND6Q5SZJ8 279 aaPredicted RBP13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 FAM160B1Q5W0V3 765 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 PADI6Q6TGC4 694 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 INTS8Q75QN2 995 aaKnown RBP13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 OTUD6AQ7L8S5 288 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 USP37Q86T82 979 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 TRIM50Q86XT4 487 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 C4orf19Q8IY42 314 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 SYCE1Q8N0S2 351 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 AFAP1L1Q8TED9 768 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 RHOXF2Q9BQY4 288 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 C16orf70Q9BSU1 422 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 CRACR2AQ9BSW2 395 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 SELENOOQ9BVL4 669 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 SMARCAD1Q9H4L7 1026 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 TUT1Q9H6E5 874 aaKnown RBP13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 ZNF302Q9NR11 478 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 DMAC2Q9NW81 257 aa13.93□□□□□ -0.18
SMARCB1-203ENST00000407082 A0A0A6YYK5 440 aaPredicted RBP13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 ABHD14A-ACY1A0A1B0GW23 586 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 RSPH10B2B2RC85 870 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 H0YCG3 227 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 LGR5O75473 907 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 RSPH10BP0C881 870 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 HOXD13P35453 343 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 PLA2G4AP47712 749 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 SMTNP53814 917 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 NPEPPSP55786 919 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 PSMC5P62195 406 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 GFPT1Q06210 699 aaPredicted RBP13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 CLUL1Q15846 466 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 TCTN1Q2MV58 587 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 GDF6Q6KF10 455 aaPredicted RBP13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 PLPPR4Q7Z2D5 763 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 CCDC60Q8IWA6 550 aaPredicted RBP13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 GOLGA6L1Q8N7Z2 621 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 KAT2BQ92831 832 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 SLC35C1Q96A29 364 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 MRPL38Q96DV4 380 aaKnown RBP13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 OSBPL9Q96SU4 736 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 MMS19Q96T76 1030 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 PCYT2Q99447 389 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 KATNAL1Q9BW62 490 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 STK33Q9BYT3 514 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 C17orf75Q9HAS0 396 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms