RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 PLXNA3P51805 1871 aa17.29■□□□□ 0.36
GDPD3-202ENST00000406256 GOLGA8IPA6NC78 632 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 GOLGA8JA6NMD2 632 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 KINO60870 393 aaKnown RBP17.28■□□□□ 0.36
GDPD3-202ENST00000406256 KIF4AO95239 1232 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 POU5F1Q01860 360 aaKnown RBP17.28■□□□□ 0.36
GDPD3-202ENST00000406256 ARMCX5Q6P1M9 558 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 TAS1R1Q7RTX1 841 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 DDX53Q86TM3 631 aaKnown RBP17.28■□□□□ 0.36
GDPD3-202ENST00000406256 BRSK2Q8IWQ3 736 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 EFCAB13Q8IY85 973 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 SMYD4Q8IYR2 804 aaPredicted RBP17.28■□□□□ 0.36
GDPD3-202ENST00000406256 TMEM169Q96HH4 297 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 GSDMAQ96QA5 445 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 RPF1Q9H9Y2 349 aaKnown RBP17.28■□□□□ 0.36
GDPD3-202ENST00000406256 TLR9Q9NR96 1032 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 HSPBP1Q9NZL4 362 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 CLIC2O15247 247 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 EXTL3O43909 919 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 CSPG5O95196 566 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 NFICP08651 508 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 BMP6P22004 513 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 CLCNKBP51801 687 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
GDPD3-202ENST00000406256 COL19A1Q14993 1142 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 UPP1Q16831 310 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 ZCWPW2Q504Y3 356 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 CBWD2Q8IUF1 395 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 GUF1Q8N442 669 aaKnown RBP17.28■□□□□ 0.36
GDPD3-202ENST00000406256 TMEM174Q8WUU8 243 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 FAM84AQ96KN4 292 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 FAM213AQ9BRX8 229 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 GPR62Q9BZJ7 368 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 GZF1Q9H116 711 aaPredicted RBP17.28■□□□□ 0.36
GDPD3-202ENST00000406256 DMAC2Q9NW81 257 aa17.28■□□□□ 0.36
GDPD3-202ENST00000406256 CARNS1A5YM72 827 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 HIDE1A8MVS5 230 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 TMEM189-UBE2V1I3L0A0 370 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 GUCY2FP51841 1108 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 SNRPFP62306 86 aaKnown RBP17.27■□□□□ 0.35
GDPD3-202ENST00000406256 PPP2R3AQ06190 1150 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 CCDC85BQ15834 202 aaPredicted RBP17.27■□□□□ 0.35
GDPD3-202ENST00000406256 PTPROQ16827 1216 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 TIGD5Q53EQ6 642 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 TCEAL5Q5H9L2 206 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 SCARA3Q6AZY7 606 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 JADE1Q6IE81 842 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 GPD1LQ8N335 351 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 NSUN3Q9H649 340 aaKnown RBP17.27■□□□□ 0.35
GDPD3-202ENST00000406256 ASB7Q9H672 318 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 MAN1B1Q9UKM7 699 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 ADAM28Q9UKQ2 775 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 MAPK8IP1Q9UQF2 711 aa17.27■□□□□ 0.35
GDPD3-202ENST00000406256 MTCL1Q9Y4B5 1905 aaKnown RBP17.26■□□□□ 0.35
GDPD3-202ENST00000406256 PTPRJQ12913 1337 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 PDXKO00764 312 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 KIAA0391O15091 583 aaKnown RBP17.26■□□□□ 0.35
GDPD3-202ENST00000406256 LILRB3O75022 631 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 LRPAP1P30533 357 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 GTF2F1P35269 517 aaKnown RBP eCLIP17.26■□□□□ 0.35
GDPD3-202ENST00000406256 HYAL1Q12794 435 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 ZNF658Q5TYW1 1059 aaPredicted RBP17.26■□□□□ 0.35
GDPD3-202ENST00000406256 FUT10Q6P4F1 479 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 CD302Q8IX05 232 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 VPS52Q8N1B4 723 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 MICALL1Q8N3F8 863 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 GPT2Q8TD30 523 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 HASPINQ8TF76 798 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 AUTS2Q8WXX7 1259 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 SMARCE1Q969G3 411 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 KIF12Q96FN5 646 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 CCDC34Q96HJ3 373 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 GBP4Q96PP9 640 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 TCF25Q9BQ70 676 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 HERC2P3Q9BVR0 1158 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 SLC38A7Q9NVC3 462 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 TRAF3IP3Q9Y228 551 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 IRAK3Q9Y616 596 aa17.26■□□□□ 0.35
GDPD3-202ENST00000406256 PPEF2O14830 753 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 LDHAP00338 332 aaKnown RBP17.25■□□□□ 0.35
GDPD3-202ENST00000406256 SOD2P04179 222 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 CTSAP10619 480 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 CYP3A5P20815 502 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 PRCPP42785 496 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 KRT17Q04695 432 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 PTPN14Q15678 1187 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 SPATA1Q5VX52 437 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 PLPP4Q5VZY2 271 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 HS2ST1Q7LGA3 356 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 SLC9A9Q8IVB4 645 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 CXorf38Q8TB03 319 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 PLEKHO2Q8TD55 490 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 B3GALT6Q96L58 329 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 UROC1Q96N76 676 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 COLEC11Q9BWP8 271 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 CHST7Q9NS84 486 aa17.25■□□□□ 0.35
GDPD3-202ENST00000406256 CGNQ9P2M7 1197 aaKnown RBP17.25■□□□□ 0.35
GDPD3-202ENST00000406256 UBQLN1Q9UMX0 589 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms