RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TMOD2Q9NZR1 351 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 WDR64B1ANS9 1081 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 VWA5AO00534 786 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 FDX1P10109 184 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 RRM1P23921 792 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 GTF2H1P32780 548 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 SMTNP53814 917 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 TAS2R40P59535 323 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 CXCL9Q07325 125 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 ZNF252P-AS1Q0IIN9 211 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 XKR9Q5GH70 373 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 SWT1Q5T5J6 900 aaKnown RBP10.53□□□□□ -0.72
MSH2-202ENST00000406134 DENND2CQ68D51 928 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 SPOPLQ6IQ16 392 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 VSIG10LQ86VR7 867 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 CYP4X1Q8N118 509 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 UBR7Q8N806 425 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 CHMP6Q96FZ7 201 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 CNOT10Q9H9A5 744 aaKnown RBP10.53□□□□□ -0.72
MSH2-202ENST00000406134 SLC40A1Q9NP59 571 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 MAP3K20Q9NYL2 800 aaKnown RBP10.53□□□□□ -0.72
MSH2-202ENST00000406134 ADAMTS5Q9UNA0 930 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 SLC12A4Q9UP95 1085 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 STYXL1Q9Y6J8 313 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 TCF4P15884 667 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 GCAP28676 217 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 SCTRP47872 440 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 CENPCQ03188 943 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 KRT17Q04695 432 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 ENPEPQ07075 957 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 FSTL1Q12841 308 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 MTMR2Q13614 643 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 PTK6Q13882 451 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 CLUL1Q15846 466 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 CCDC38Q502W7 563 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 LMBRD2Q68DH5 695 aaPredicted RBP10.53□□□□□ -0.72
MSH2-202ENST00000406134 LRRC34Q8IZ02 419 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 AGBL3Q8NEM8 1001 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 CPA5Q8WXQ8 436 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 LPAR1Q92633 364 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 RMDN3Q96TC7 470 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 PRMT1Q99873 361 aaKnown RBP10.53□□□□□ -0.72
MSH2-202ENST00000406134 TCRBV5S1A1TA0A578 114 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 FAM189A1O60320 539 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 SLCO1A2P46721 670 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 JAK3P52333 1124 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 NLRP11P59045 1033 aaKnown RBP10.53□□□□□ -0.72
MSH2-202ENST00000406134 DRP2Q13474 957 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 PRUNE1Q86TP1 453 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 MCF2L2Q86YR7 1114 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 DCLK3Q9C098 648 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 MYOZ2Q9NPC6 264 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 ADGRA2Q96PE1 1338 aa10.53□□□□□ -0.72
MSH2-202ENST00000406134 AGTP01019 485 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 MYCLP12524 364 aaPredicted RBP10.52□□□□□ -0.72
MSH2-202ENST00000406134 PDE6CP51160 858 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 RWDD2BP57060 319 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 LONRF1Q17RB8 773 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 SEL1L2Q5TEA6 688 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 PHLDB2Q86SQ0 1253 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 HOOK3Q86VS8 718 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 OGFOD1Q8N543 542 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 ATG4CQ96DT6 458 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 AVENQ9NQS1 362 aaPredicted RBP10.52□□□□□ -0.72
MSH2-202ENST00000406134 WHRNQ9P202 907 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 ZNF214Q9UL59 606 aaPredicted RBP10.52□□□□□ -0.72
MSH2-202ENST00000406134 CNTN6Q9UQ52 1028 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 NFASCO94856 1347 aa10.52□□□□□ -0.72
MSH2-202ENST00000406134 TTLL13PA6NNM8 815 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 CLGNO14967 610 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 ASAP2O43150 1006 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 CTNND1O60716 968 aaKnown RBP10.52□□□□□ -0.73
MSH2-202ENST00000406134 KLRC2P26717 231 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 SFNP31947 248 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 ZACNQ401N2 412 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 ABHD15Q6UXT9 468 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 GLIS1Q8NBF1 620 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 CAMKK2Q96RR4 588 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 RPAP3Q9H6T3 665 aaPredicted RBP10.52□□□□□ -0.73
MSH2-202ENST00000406134 KMT5AQ9NQR1 393 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 GABBR1Q9UBS5 961 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 ANAPC7Q9UJX3 599 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 CNTNAP2Q9UHC6 1331 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 GJB6O95452 261 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 KRT76Q01546 638 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 XRCC4Q13426 336 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 BAATQ14032 418 aaPredicted RBP10.52□□□□□ -0.73
MSH2-202ENST00000406134 FUKQ8N0W3 1084 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 GPD1LQ8N335 351 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 NT5C1BQ96P26 610 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 KDM4CQ9H3R0 1056 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 FZD1Q9UP38 647 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 AGAP1Q9UPQ3 857 aa10.52□□□□□ -0.73
MSH2-202ENST00000406134 SMIM23A6NLE4 172 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 CCDC169A6NNP5 214 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 GH1P01241 217 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 RTP1P59025 263 aa10.51□□□□□ -0.73
MSH2-202ENST00000406134 DMP1Q13316 513 aaPredicted RBP10.51□□□□□ -0.73
MSH2-202ENST00000406134 SNX1Q13596 522 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms