RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PPP3CAQ08209 521 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 ZRSR2Q15696 482 aaKnown RBP6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 ADRM1Q16186 407 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 MST1LQ2TV78 715 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 UAP1L1Q3KQV9 507 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 GRAMD1BQ3KR37 738 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 MFSD5Q6N075 450 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 ERAP2Q6P179 960 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 GPRIN1Q7Z2K8 1008 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 APBB1IPQ7Z5R6 666 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 DENND1CQ8IV53 801 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 FAM156AQ8NDB6 213 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 VPS11Q9H270 941 aa6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 AURKAIP1Q9NWT8 199 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P13-201ENST00000406019 CYP27B1O15528 508 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 B3GALT2O43825 422 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 PPFIA4O75335 1185 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 FOSP01100 380 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 AMHP03971 560 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 C6P13671 934 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 TM4SF4P48230 202 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 AK2P54819 239 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 FAM193AP78312 1265 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 SLC25A3Q00325 362 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 HHEXQ03014 270 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 SEMA5AQ13591 1074 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 TOB2Q14106 344 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 KRT72Q14CN4 511 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 LLGL1Q15334 1064 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 PGS1Q32NB8 556 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 NRN1LQ496H8 165 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 FNDC7Q5VTL7 733 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 PPM1NQ8N819 430 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 GLB1L3Q8NCI6 653 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 OR52N2Q8NGI0 321 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 PDCD2LQ9BRP1 358 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 NCDNQ9UBB6 729 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 TRPS1Q9UHF7 1281 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 L1RE1Q9UN81 338 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 IPPQ9Y573 584 aa6.15□□□□□ -1.42
HMGB1P13-201ENST00000406019 HTRA2O43464 458 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 UBXN7O94888 489 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 GYPEP15421 78 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 PAX3P23760 479 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 ACVRL1P37023 503 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 GZMKP49863 264 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 AGFG1P52594 562 aaKnown RBP6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 SLC16A1P53985 500 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 DUSP2Q05923 314 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 INO80DQ53TQ3 878 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 DCAF17Q5H9S7 520 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 METTL24Q5JXM2 366 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 TMED8Q6PL24 325 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 BTNL9Q6UXG8 535 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 Q6ZVL8 140 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 DOK3Q7L591 496 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 C1orf210Q8IVY1 113 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 ENAHQ8N8S7 591 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 PARD3BQ8TEW8 1205 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 ST8SIA2Q92186 375 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 LRFN3Q9BTN0 628 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 NLRC4Q9NPP4 1024 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 PLCB1Q9NQ66 1216 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 GPRC5DQ9NZD1 345 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 LIMCH1Q9UPQ0 1083 aa6.14□□□□□ -1.43
HMGB1P13-201ENST00000406019 CCDC189A1A4V9 331 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 ADCY6O43306 1168 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 DTNBO60941 627 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 ITGA10O75578 1167 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 FGAP02671 866 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 MAN2A2P49641 1150 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 PTTG1IPP53801 180 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 MALLQ13021 153 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 PAWRQ96IZ0 340 aaKnown RBP6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 MYD88Q99836 296 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 ACE2Q9BYF1 805 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 UBA5Q9GZZ9 404 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 KCNH6Q9H252 994 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 BHMT2Q9H2M3 363 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 XDHP47989 1333 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 RPTORQ8N122 1335 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 ZMYM3Q14202 1370 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 ATRNL1Q5VV63 1379 aa6.13□□□□□ -1.43
HMGB1P13-201ENST00000406019 ABHD14A-ACY1A0A1B0GW23 586 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 CCDC154A6NI56 674 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 NARSO43776 548 aaKnown RBP6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 PRAMEF4O60810 478 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 TCEA3O75764 348 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 ALDH2P05091 517 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 ZKSCAN1P17029 563 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 CRHR1P34998 444 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 CDK17Q00537 523 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 PTH1RQ03431 593 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 TMEM95Q3KNT9 176 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 HSP90AB4PQ58FF6 505 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 XRRA1Q6P2D8 792 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 NPNTQ6UXI9 565 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 CCDC149Q6ZUS6 474 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 SRLQ86TD4 932 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms