RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 WDR49Q8IV35 697 aa4□□□□□ -1.77
RTN4-208ENST00000404909 RNF169Q8NCN4 708 aa4□□□□□ -1.77
RTN4-208ENST00000404909 ACRBPQ8NEB7 543 aa4□□□□□ -1.77
RTN4-208ENST00000404909 DHX38Q92620 1227 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 TATDN2Q93075 761 aa4□□□□□ -1.77
RTN4-208ENST00000404909 ANKRD36BP1Q96IX9 119 aa4□□□□□ -1.77
RTN4-208ENST00000404909 C16orf45Q96MC5 204 aaPredicted RBP4□□□□□ -1.77
RTN4-208ENST00000404909 NT5C1BQ96P26 610 aa4□□□□□ -1.77
RTN4-208ENST00000404909 OSBPL7Q9BZF2 842 aa4□□□□□ -1.77
RTN4-208ENST00000404909 EDEM3Q9BZQ6 932 aa4□□□□□ -1.77
RTN4-208ENST00000404909 SPTLC3Q9NUV7 552 aa4□□□□□ -1.77
RTN4-208ENST00000404909 KLK14Q9P0G3 267 aa4□□□□□ -1.77
RTN4-208ENST00000404909 R3HCC1Q9Y3T6 440 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 MROH7Q68CQ1 1323 aa4□□□□□ -1.77
RTN4-208ENST00000404909 FOXN3O00409 490 aaPredicted RBP4□□□□□ -1.77
RTN4-208ENST00000404909 IL18RAPO95256 599 aa4□□□□□ -1.77
RTN4-208ENST00000404909 IPO7O95373 1038 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 VNN1O95497 513 aa4□□□□□ -1.77
RTN4-208ENST00000404909 CST3P01034 146 aaPredicted RBP4□□□□□ -1.77
RTN4-208ENST00000404909 HSPA8P11142 646 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 EIF4A3P38919 411 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 STAT1P42224 750 aa4□□□□□ -1.77
RTN4-208ENST00000404909 GUCY2FP51841 1108 aa4□□□□□ -1.77
RTN4-208ENST00000404909 CLDN10P78369 228 aa4□□□□□ -1.77
RTN4-208ENST00000404909 CYP27A1Q02318 531 aa4□□□□□ -1.77
RTN4-208ENST00000404909 PAK2Q13177 524 aa4□□□□□ -1.77
RTN4-208ENST00000404909 PTK7Q13308 1070 aa4□□□□□ -1.77
RTN4-208ENST00000404909 PCBP1Q15365 356 aaKnown RBP eCLIP4□□□□□ -1.776e-8■■□□□ 14.5
RTN4-208ENST00000404909 SURF1Q15526 300 aa4□□□□□ -1.77
RTN4-208ENST00000404909 MEA1Q16626 185 aa4□□□□□ -1.77
RTN4-208ENST00000404909 SLC10A6Q3KNW5 377 aa4□□□□□ -1.77
RTN4-208ENST00000404909 TRAPPC11Q7Z392 1133 aa4□□□□□ -1.77
RTN4-208ENST00000404909 EFCAB13Q8IY85 973 aa4□□□□□ -1.77
RTN4-208ENST00000404909 CCAR2Q8N163 923 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 ZNF710Q8N1W2 664 aa4□□□□□ -1.77
RTN4-208ENST00000404909 U2AF1L4Q8WU68 220 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 KIF12Q96FN5 646 aa4□□□□□ -1.77
RTN4-208ENST00000404909 STK33Q9BYT3 514 aa4□□□□□ -1.77
RTN4-208ENST00000404909 IMPG2Q9BZV3 1241 aa4□□□□□ -1.77
RTN4-208ENST00000404909 NUCKS1Q9H1E3 243 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 CXCL16Q9H2A7 254 aa4□□□□□ -1.77
RTN4-208ENST00000404909 RNF39Q9H2S5 420 aa4□□□□□ -1.77
RTN4-208ENST00000404909 AGO3Q9H9G7 860 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 C1orf112Q9NSG2 853 aa4□□□□□ -1.77
RTN4-208ENST00000404909 ARHGAP20Q9P2F6 1191 aa4□□□□□ -1.77
RTN4-208ENST00000404909 PHF24Q9UPV7 400 aa4□□□□□ -1.77
RTN4-208ENST00000404909 PPP2R2CQ9Y2T4 447 aa4□□□□□ -1.77
RTN4-208ENST00000404909 EPN1Q9Y6I3 576 aaPredicted RBP4□□□□□ -1.77
RTN4-208ENST00000404909 F8VZ95 297 aa4□□□□□ -1.77
RTN4-208ENST00000404909 GPR182O15218 404 aa4□□□□□ -1.77
RTN4-208ENST00000404909 RECQL4O94761 1208 aa4□□□□□ -1.77
RTN4-208ENST00000404909 NDUFA10O95299 355 aa4□□□□□ -1.77
RTN4-208ENST00000404909 SERPING1P05155 500 aa4□□□□□ -1.77
RTN4-208ENST00000404909 CCDC175P0C221 793 aa4□□□□□ -1.77
RTN4-208ENST00000404909 HSPA1AP0DMV8 641 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 HSPA1BP0DMV9 641 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 CKBP12277 381 aa4□□□□□ -1.77
RTN4-208ENST00000404909 KRT5P13647 590 aa4□□□□□ -1.77
RTN4-208ENST00000404909 ZSCAN20P17040 1043 aaPredicted RBP4□□□□□ -1.77
RTN4-208ENST00000404909 AXLP30530 894 aa4□□□□□ -1.77
RTN4-208ENST00000404909 CYLC1P35663 651 aaPredicted RBP4□□□□□ -1.77
RTN4-208ENST00000404909 TMEM132DQ14C87 1099 aa4□□□□□ -1.77
RTN4-208ENST00000404909 C15orf39Q6ZRI6 1047 aa4□□□□□ -1.77
RTN4-208ENST00000404909 ARID3AQ99856 593 aa4□□□□□ -1.77
RTN4-208ENST00000404909 HAUS4Q9H6D7 363 aa4□□□□□ -1.77
RTN4-208ENST00000404909 LZTFL1Q9NQ48 299 aa4□□□□□ -1.77
RTN4-208ENST00000404909 SEPT11Q9NVA2 429 aaKnown RBP4□□□□□ -1.77
RTN4-208ENST00000404909 PADI3Q9ULW8 664 aa4□□□□□ -1.77
RTN4-208ENST00000404909 COQ4Q9Y3A0 265 aa4□□□□□ -1.77
RTN4-208ENST00000404909 A0A0U1RQJ8 604 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 PMM2O15305 246 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 MEFVO15553 781 aaPredicted RBP3.99□□□□□ -1.77
RTN4-208ENST00000404909 ZSCAN12O43309 604 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 EVI5O60447 810 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 ITGB3P05106 788 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 HNRNPH3P31942 346 aaKnown RBP3.99□□□□□ -1.77
RTN4-208ENST00000404909 SOX5P35711 763 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 GRM5P41594 1212 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 KIF11P52732 1056 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 AP3M2P53677 418 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 MFAP3P55082 362 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 MYL6P60660 151 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 NOP14P78316 857 aaKnown RBP3.99□□□□□ -1.77
RTN4-208ENST00000404909 PTK2Q05397 1052 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 PTPN11Q06124 597 aaPredicted RBP3.99□□□□□ -1.77
RTN4-208ENST00000404909 GFPT1Q06210 699 aaPredicted RBP3.99□□□□□ -1.77
RTN4-208ENST00000404909 SPA17Q15506 151 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 KYAT1Q16773 422 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 FBXO47Q5MNV8 452 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 HGSNATQ68CP4 663 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 FBXO46Q6PJ61 603 aaPredicted RBP3.99□□□□□ -1.77
RTN4-208ENST00000404909 SCARA5Q6ZMJ2 495 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 ATRIPQ8WXE1 791 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 ZNF592Q92610 1267 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 PPP1R13BQ96KQ4 1090 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 KREMEN1Q96MU8 473 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 ASB7Q9H672 318 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 ACP6Q9NPH0 428 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 AIPL1Q9NZN9 384 aa3.99□□□□□ -1.77
RTN4-208ENST00000404909 NXF1Q9UBU9 619 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms