RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 MTMR3Q13615 1198 aa25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 RPS6KA1Q15418 735 aa25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 CPLX4Q7Z7G2 160 aa25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 KSR1Q8IVT5 923 aa25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 IKZF4Q9H2S9 585 aa25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 DYNC1LI2O43237 492 aaPredicted RBP25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 LGALS2P05162 132 aa25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 ELF3P78545 371 aaPredicted RBP25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 ZC2HC1CQ53FD0 456 aaPredicted RBP25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 FAM102BQ5T8I3 360 aa25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 PDLIM7Q9NR12 457 aa25.25■■□□□ 1.63
TRIOBP-203ENST00000403663 A0A1B0GUA9 196 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 SART1O43290 800 aaKnown RBP25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 ELNP15502 786 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 POLR2FP61218 127 aaKnown RBP25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 ODR4Q5SWX8 454 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 EPM2AIP1Q7L775 607 aaPredicted RBP25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 MYOCDQ8IZQ8 938 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 ACTRT1Q8TDG2 376 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 NIFKQ9BYG3 293 aaKnown RBP25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 RNPEPQ9H4A4 650 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 ADAMTS1Q9UHI8 967 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 RTN2O75298 545 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 KIF4AO95239 1232 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 KIF22Q14807 665 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 TARBP2Q15633 366 aaKnown RBP25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 ZBTB10Q96DT7 871 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 OLFML3Q9NRN5 406 aa25.24■■□□□ 1.63
TRIOBP-203ENST00000403663 ZBTB42B2RXF5 422 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 ATP6V1G2O95670 118 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 GAP43P17677 238 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 SATB1Q01826 763 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 PLPPR4Q7Z2D5 763 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 TRAPPC12Q8WVT3 735 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 BSNDQ8WZ55 320 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 PBKQ96KB5 322 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 CALR3Q96L12 384 aaKnown RBP25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 AP1M1Q9BXS5 423 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 GCNT3O95395 438 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 MMP3P08254 477 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 TMC3Q7Z5M5 1100 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 C16orf70Q9BSU1 422 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 LSM14BQ9BX40 385 aaKnown RBP25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 NOD2Q9HC29 1040 aa25.23■■□□□ 1.63
TRIOBP-203ENST00000403663 CEP104O60308 925 aa25.22■■□□□ 1.63
TRIOBP-203ENST00000403663 TLK2Q86UE8 772 aa25.22■■□□□ 1.63
TRIOBP-203ENST00000403663 CHMP6Q96FZ7 201 aa25.22■■□□□ 1.63
TRIOBP-203ENST00000403663 SMARCAD1Q9H4L7 1026 aa25.22■■□□□ 1.63
TRIOBP-203ENST00000403663 ARID5AQ03989 594 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 FAM178BQ8IXR5 827 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 PPP1R13LQ8WUF5 828 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 DDX47Q9H0S4 455 aaKnown RBP25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 LRRC4CQ9HCJ2 640 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 EVPLQ92817 2033 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 BTNL10A8MVZ5 291 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 DGAT1O75907 488 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 RPSAP08865 295 aaKnown RBP25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 CYBAP13498 195 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 EMC2Q15006 297 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 KRT71Q3SY84 523 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 ERMARDQ5T6L9 678 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 ATP8B4Q8TF62 1192 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 ZNF296Q8WUU4 475 aaPredicted RBP25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 TMEM143Q96AN5 459 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 KIFC3Q9BVG8 833 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 GOLPH3Q9H4A6 298 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 DHX33Q9H6R0 707 aaKnown RBP25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 NRBP2Q9NSY0 501 aa25.21■■□□□ 1.63
TRIOBP-203ENST00000403663 CCT8L1PA6NM43 557 aa25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 DAPK3O43293 454 aa25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 NEBLO76041 1014 aa25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 POLGP54098 1239 aaPredicted RBP25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 RAPGEF1Q13905 1077 aa25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 KCTD19Q17RG1 926 aaPredicted RBP25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 ACCSLQ4AC99 568 aa25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 HIBCHQ6NVY1 386 aaPredicted RBP25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 ZNF720Q7Z2F6 126 aa25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 XPO6Q96QU8 1125 aaKnown RBP25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 TSG101Q99816 390 aa25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 KCTD10Q9H3F6 313 aa25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 CNOT10Q9H9A5 744 aaKnown RBP25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 SRRDQ9UH36 339 aa25.2■■□□□ 1.63
TRIOBP-203ENST00000403663 PLS3P13797 630 aa25.2■■□□□ 1.62
TRIOBP-203ENST00000403663 PEX3P56589 373 aa25.2■■□□□ 1.62
TRIOBP-203ENST00000403663 KLHL30Q0D2K2 578 aa25.2■■□□□ 1.62
TRIOBP-203ENST00000403663 PPP2R5AQ15172 486 aa25.2■■□□□ 1.62
TRIOBP-203ENST00000403663 ZCWPW2Q504Y3 356 aa25.2■■□□□ 1.62
TRIOBP-203ENST00000403663 KIRREL3Q8IZU9 778 aa25.2■■□□□ 1.62
TRIOBP-203ENST00000403663 MDM1Q8TC05 714 aa25.2■■□□□ 1.62
TRIOBP-203ENST00000403663 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.2■■□□□ 1.622e-6■■□□□ 12.6
TRIOBP-203ENST00000403663 AIPL1Q9NZN9 384 aa25.2■■□□□ 1.62
TRIOBP-203ENST00000403663 TRPC6Q9Y210 931 aa25.2■■□□□ 1.62
TRIOBP-203ENST00000403663 F8VZ95 297 aa25.19■■□□□ 1.62
TRIOBP-203ENST00000403663 PGRMC1O00264 195 aaKnown RBP25.19■■□□□ 1.62
TRIOBP-203ENST00000403663 GBP2P32456 591 aaPredicted RBP25.19■■□□□ 1.62
TRIOBP-203ENST00000403663 CACNB2Q08289 660 aaPredicted RBP25.19■■□□□ 1.62
TRIOBP-203ENST00000403663 PPP1R7Q15435 360 aa25.19■■□□□ 1.62
TRIOBP-203ENST00000403663 FOXR2Q6PJQ5 311 aa25.19■■□□□ 1.62
TRIOBP-203ENST00000403663 FMNL3Q8IVF7 1028 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms