RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 USP32Q8NFA0 1604 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 PHF2O75151 1096 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 PHEXP78562 749 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 KLHDC7AQ5VTJ3 777 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 MKNK1Q9BUB5 465 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 TMEM8AQ9HCN3 771 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 WDR35Q9P2L0 1181 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 MYO1CO00159 1063 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 PPP1R12AO14974 1030 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-204ENST00000400337 DIAPH2O60879 1101 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 PDGFRBP09619 1106 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 C6orf222P0C671 652 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-204ENST00000400337 SULT1E1P49888 294 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 ARFIP2P53365 341 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 ELOA2Q8IYF1 753 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-204ENST00000400337 PIP4K2CQ8TBX8 421 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 POLR3CQ9BUI4 534 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-204ENST00000400337 SMYD3Q9H7B4 428 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 RBM12Q9NTZ6 932 aaKnown RBP19.2■□□□□ 0.66
COL18A1-204ENST00000400337 MORC2Q9Y6X9 1032 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-204ENST00000400337 MAGEB2O15479 319 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 GUCY1A3Q02108 690 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 CCDC138Q96M89 665 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 ZBTB18Q99592 522 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 FAM96AQ9H5X1 160 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 SESN2P58004 480 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-204ENST00000400337 TADA2BQ86TJ2 420 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 ACER1Q8TDN7 264 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 PI4K2AQ9BTU6 479 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 ADAM33Q9BZ11 813 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 ZBBXA8MT70 800 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 ATMINO43313 823 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-204ENST00000400337 TPI1P60174 286 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 KRT33BQ14525 404 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 P3H1Q32P28 736 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 ATF7IP2Q5U623 682 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 ATXN7L3BQ96GX2 97 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 KIFC3Q9BVG8 833 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 MRPL46Q9H2W6 279 aaKnown RBP19.19■□□□□ 0.66
COL18A1-204ENST00000400337 THEGQ9P2T0 379 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 PCDHB2Q9Y5E7 798 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 IGSF9BQ9UPX0 1349 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 DIP2BQ9P265 1576 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 ACTR2P61160 394 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 CDC42EP1Q00587 391 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 GRB10Q13322 594 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 GJB7Q6PEY0 223 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 TXNRD3Q86VQ6 643 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 BTBD6Q96KE9 485 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 PLEKHA5Q9HAU0 1116 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 GRIK1P39086 918 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 STAT4Q14765 748 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 STILQ15468 1287 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 ANGPTL8Q6UXH0 198 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 TRMT10CQ7L0Y3 403 aaKnown RBP19.19■□□□□ 0.66
COL18A1-204ENST00000400337 RNF135Q8IUD6 432 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 PRMT6Q96LA8 375 aaPredicted RBP19.19■□□□□ 0.66
COL18A1-204ENST00000400337 EPAS1Q99814 870 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 DRC3Q9H069 523 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 UNC45AQ9H3U1 944 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 SCOCQ9UIL1 159 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 HACL1Q9UJ83 578 aa19.19■□□□□ 0.66
COL18A1-204ENST00000400337 ATP5HO75947 161 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 MKRN4PQ13434 485 aaPredicted RBP19.18■□□□□ 0.66
COL18A1-204ENST00000400337 KRT82Q9NSB4 513 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 FGFR2P21802 821 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 HSD17B4P51659 736 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 EPC2Q52LR7 807 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 PGBD4Q96DM1 585 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 TRIM62Q9BVG3 475 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 TARS2Q9BW92 718 aaKnown RBP19.18■□□□□ 0.66
COL18A1-204ENST00000400337 ANKEF1Q9NU02 776 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 TFR2Q9UP52 801 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 WEE2P0C1S8 567 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 COMTP21964 271 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 EFCAB12Q6NXP0 572 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 KDELC2Q7Z4H8 507 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 LCA5Q86VQ0 697 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 RUSC1Q9BVN2 902 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 E5RI56 91 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 MEGF6O75095 1541 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 GRAP2O75791 330 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 SLC25A27O95847 323 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 GYS1P13807 737 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 EEF1B2P24534 225 aaKnown RBP19.18■□□□□ 0.66
COL18A1-204ENST00000400337 KLRC1P26715 233 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 ESRRGP62508 458 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 FOXD4Q12950 439 aaPredicted RBP19.18■□□□□ 0.66
COL18A1-204ENST00000400337 AGBL3Q8NEM8 1001 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 CHST13Q8NET6 341 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 RUBCNQ92622 972 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 RMDN2Q96LZ7 410 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 ERGIC2Q96RQ1 377 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 CYP11B2P19099 503 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 KCTD17Q8N5Z5 321 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 ALG13Q9NP73 1137 aaKnown RBP19.18■□□□□ 0.66
COL18A1-204ENST00000400337 ZFATQ9P243 1243 aa19.18■□□□□ 0.66
COL18A1-204ENST00000400337 EXTL3O43909 919 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 APRTP07741 180 aa19.17■□□□□ 0.66
COL18A1-204ENST00000400337 SYDE1Q6ZW31 735 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms