RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.99□□□□□ -0.49
TTC28-201ENST00000397906 DIS3Q9Y2L1 958 aaKnown RBP11.99□□□□□ -0.49
TTC28-201ENST00000397906 MIF4GDA9UHW6 222 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 CSE1LP55060 971 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 C6orf118Q5T5N4 469 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 GTF3C2Q8WUA4 911 aaPredicted RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 ADARB2Q9NS39 739 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 FAM47DPA6NHR8 397 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 NR1D1P20393 614 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 WEE1P30291 646 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 SF3B3Q15393 1217 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 CPB2Q96IY4 423 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 UNC45AQ9H3U1 944 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 E9PCH4 1651 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 ZNF609O15014 1411 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 WDR19Q8NEZ3 1342 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 CD4P01730 458 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 MMEP08473 750 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 C18orf8Q96DM3 657 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 SLC38A7Q9NVC3 462 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 CPSF2Q9P2I0 782 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 ESYT3A0FGR9 886 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 NBPF9Q3BBW0 867 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 SPDYAQ5MJ70 313 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 STOX1Q6ZVD7 989 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 MXRA8Q9BRK3 442 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 GBA2Q9HCG7 927 aaPredicted RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 FBXO28Q9NVF7 368 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 PPARGC1AQ9UBK2 798 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 NAGPAQ9UK23 515 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 DDNO94850 711 aaPredicted RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 CENPKQ9BS16 269 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 PI4K2AQ9BTU6 479 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 TRIM15Q9C019 465 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 NCAM1P13591 858 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 ACAD11Q709F0 780 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 FGFR1OP2Q9NVK5 253 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 HDAC6Q9UBN7 1215 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 VTNP04004 478 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 RPS6P62753 249 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 NOTUMQ6P988 496 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 PLEKHH3Q7Z736 793 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 RNF14Q9UBS8 474 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 ZSCAN9O15535 394 aaPredicted RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 GABPB1Q06547 395 aaPredicted RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 KCNB1Q14721 858 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 GOLGA7BQ2TAP0 167 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 ZNF521Q96K83 1311 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 ATP6V1E1P36543 226 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 MORF4L2Q15014 288 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 SMAP1Q8IYB5 467 aaPredicted RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 UPF3AQ9H1J1 476 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 NYAP2Q9P242 653 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 LCMT1Q9UIC8 334 aa11.98□□□□□ -0.49
TTC28-201ENST00000397906 APOBEC2Q9Y235 224 aaKnown RBP11.98□□□□□ -0.49
TTC28-201ENST00000397906 PDGFRAP16234 1089 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 ASAP3Q8TDY4 903 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 TMEM169Q96HH4 297 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 AGPAT1Q99943 283 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 FAM118BQ9BPY3 351 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 DDX47Q9H0S4 455 aaKnown RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 POLLQ9UGP5 575 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 PITPNM2Q9BZ72 1349 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 ORC2Q13416 577 aaPredicted RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 SHC4Q6S5L8 630 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 CAPN10Q9HC96 672 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 PQBP1O60828 265 aaKnown RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 RASA1P20936 1047 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 SCP2P22307 547 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 TBC1D1Q86TI0 1168 aaPredicted RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 DHX40Q8IX18 779 aaKnown RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 SENP7Q9BQF6 1050 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 JMJD4Q9H9V9 463 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 DCTN4Q9UJW0 460 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 MAGEB2O15479 319 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 MYO1DO94832 1006 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 RPSAP08865 295 aaKnown RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 C11orf96Q7Z7L8 435 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 KLHL29Q96CT2 875 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 PLA2G12BQ9BX93 195 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 SMTNL2Q2TAL5 461 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 CCDC137Q6PK04 289 aaKnown RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 CHST13Q8NET6 341 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 MTFR1LQ9H019 292 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 AAASQ9NRG9 546 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 LAMC2Q13753 1193 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 MFSD4BQ5TF39 518 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 MMS22LQ6ZRQ5 1243 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 SNCBQ16143 134 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 SGMS1Q86VZ5 419 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 PRMT6Q96LA8 375 aaPredicted RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 SCHIP1Q9P0W5 487 aaPredicted RBP11.97□□□□□ -0.49
TTC28-201ENST00000397906 TEKT2Q9UIF3 430 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 NEXMIFQ5QGS0 1516 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 CYP4A22Q5TCH4 519 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 BFARQ9NZS9 450 aa11.97□□□□□ -0.49
TTC28-201ENST00000397906 SPDYE5A6NIY4 337 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms