RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 AMACRQ9UHK6 382 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 FAM153AQ9UHL3 310 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 SAP30BPQ9UHR5 308 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ANAPC5Q9UJX4 755 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 HAUS5O94927 633 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 GCNT3O95395 438 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ANP32DO95626 131 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PHBP35232 272 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PRELPP51888 382 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 EPC2Q52LR7 807 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ODR4Q5SWX8 454 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 WDR78Q5VTH9 848 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ALKBH8Q96BT7 664 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 CCDC28BQ9BUN5 200 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 MAK16Q9BXY0 300 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ARHGEF10LQ9HCE6 1279 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 NFASCO94856 1347 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 COL24A1Q17RW2 1714 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L10C9JJH3 530 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 F8W031 263 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PPIP5K2O43314 1243 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PLS3P13797 630 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PAPOLAP51003 745 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 CDR2Q01850 454 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ACVR2BQ13705 512 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 CERKLQ49MI3 558 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 BRDTQ58F21 947 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 DPP8Q6V1X1 898 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 OTOP1Q7RTM1 612 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 EPS8L1Q8TE68 723 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 TTC1Q99614 292 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 TUBB6Q9BUF5 446 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 GPCPD1Q9NPB8 672 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 PAIP2BQ9ULR5 123 aaKnown RBP5.79□□□□□ -1.48
PTPRD-205ENST00000397611 LZTS1Q9Y250 596 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 SORBS3O60504 671 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 WFS1O76024 890 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 TTC4O95801 387 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 HOXD13P35453 343 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 MFAP3P55082 362 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ANKRD20A4Q4UJ75 823 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ANKRD20A8PQ5CZ79 823 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ANKRD20A2Q5SQ80 823 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ANKRD20A1Q5TYW2 823 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 FAM91A1Q658Y4 838 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 C16orf87Q6PH81 154 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 SUPT20HQ8NEM7 779 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ART4Q93070 314 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 CDHR1Q96JP9 859 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 FAM161BQ96MY7 647 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ACCSQ96QU6 501 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 FERMT1Q9BQL6 677 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 TMEM260Q9NX78 707 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 GRHL1Q9NZI5 618 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 BCAP29Q9UHQ4 241 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ARL2BPQ9Y2Y0 163 aa5.79□□□□□ -1.48
PTPRD-205ENST00000397611 ARHGEF35A5YM69 484 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 GYS1P13807 737 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 CYP2J2P51589 502 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 KLC1Q07866 573 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 SYDE2Q5VT97 1194 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 NXNQ6DKJ4 435 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 C4orf19Q8IY42 314 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 STAMBPL1Q96FJ0 436 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 DDX20Q9UHI6 824 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 PCDHB2Q9Y5E7 798 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 NVLO15381 856 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 MAGEB2O15479 319 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 KCNQ2O43526 872 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 GAS7O60861 476 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 ZWINTO95229 277 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 CA4P22748 312 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 AP3M2P53677 418 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 LGSNQ5TDP6 509 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 MAEAQ7L5Y9 396 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 INTS2Q9H0H0 1204 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 VPS33BQ9H267 617 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 MRPL46Q9H2W6 279 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 SCINQ9Y6U3 715 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 DLEC1Q9Y238 1755 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L15C9J2P7 530 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L13C9JLJ4 530 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L11C9JVI0 530 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L18D6R9N7 530 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L22D6RA61 530 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L17D6RBQ6 530 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L19D6RCP7 530 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L20D6RJB6 530 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 NKRFO15226 690 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 DDX3YO15523 660 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 ATP5BP06576 529 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 EIF6P56537 245 aaKnown RBP5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L24Q0WX57 530 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 PRR16Q569H4 304 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 C1orf146Q5VVC0 180 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 USP17L6PQ6QN14 398 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 MCF2L2Q86YR7 1114 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 MYCT1Q8N699 235 aa5.78□□□□□ -1.48
PTPRD-205ENST00000397611 RBM46Q8TBY0 533 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms