RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 CT83Q5H943 113 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 NAA16Q6N069 864 aaPredicted RBP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 KDELC1Q6UW63 502 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 TMTC3Q6ZXV5 915 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 TSPYL5Q86VY4 417 aaPredicted RBP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 UNC45BQ8IWX7 931 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 ATP11CQ8NB49 1132 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 SPC24Q8NBT2 197 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 FAM71BQ8TC56 605 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 CCDC74BQ96LY2 380 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 FAM210AQ96ND0 272 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 TMEM237Q96Q45 408 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 ALPK1Q96QP1 1244 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 PPP1R9BQ96SB3 815 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 PAIP2Q9BPZ3 127 aaKnown RBP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 ACAT2Q9BWD1 397 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 PNNQ9H307 717 aaKnown RBP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 CCDC86Q9H6F5 360 aaKnown RBP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 TMEFF2Q9UIK5 374 aaPredicted RBP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 CSADQ9Y600 493 aa7.42□□□□□ -1.22
SMCO1-201ENST00000397537 PRDM15P57071 1507 aaPredicted RBP7.42□□□□□ -1.22
SMCO1-201ENST00000397537 CCDC196A0A1B0GTZ2 297 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 AGAP14A8MT82 685 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 MYO1FO00160 1098 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 FMO6PO60774 539 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 BBOX1O75936 387 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 LETM1O95202 739 aaPredicted RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ATP5BP06576 529 aaKnown RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 CSF1P09603 554 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 CCDC175P0C221 793 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 RHOQP17081 205 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 BTF3P20290 206 aaKnown RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 PTX3P26022 381 aaPredicted RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 AOAHP28039 575 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 PPP5CP53041 499 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ETF1P62495 437 aaKnown RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 RBP5P82980 135 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 DMTNQ08495 405 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 SNAPC2Q13487 334 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 TMEM266Q2M3C6 531 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ZNF674Q2M3X9 581 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 FLYWCH1Q4VC44 716 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 FAM47CQ5HY64 1035 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 LRCH2Q5VUJ6 765 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 FSTL4Q6MZW2 842 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ZFPM1Q8IX07 1006 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 KCNG4Q8TDN1 519 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 EAF2Q96CJ1 260 aaPredicted RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ALG1Q9BT22 464 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 DDX23Q9BUQ8 820 aaKnown RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 BOCQ9BWV1 1114 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 GPR63Q9BZJ6 419 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 MLXIPQ9HAP2 919 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 GPR27Q9NS67 375 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ABCC3O15438 1527 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 PRXQ9BXM0 1461 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 PHGDHO43175 533 aaKnown RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 BEST1O76090 585 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 CLEC2LP0C7M8 214 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 SRGAP2BP0DMP2 458 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ACADMP11310 421 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ADSLP30566 484 aaPredicted RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 CCT4P50991 539 aaKnown RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 SH3BGRP55822 239 aaPredicted RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 SCRN1Q12765 414 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 SAMD5Q5TGI4 173 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ESRP1Q6NXG1 681 aaKnown RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ZNF804AQ7Z570 1209 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 R3HCC1LQ7Z5L2 792 aaKnown RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 OXR1Q8N573 874 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 GABPB2Q8TAK5 448 aaPredicted RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 GDAP1Q8TB36 358 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 PTPN18Q99952 460 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 DPH2Q9BQC3 489 aaPredicted RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 HGH1Q9BTY7 390 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 WNT10AQ9GZT5 417 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 LIN28AQ9H9Z2 209 aaKnown RBP7.41□□□□□ -1.22
SMCO1-201ENST00000397537 MCM9Q9NXL9 1143 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 CTNNA3Q9UI47 895 aa7.41□□□□□ -1.22
SMCO1-201ENST00000397537 ZBTB42B2RXF5 422 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 ZNF862O60290 1169 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 SLC16A1P53985 500 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 KLHL30Q0D2K2 578 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 BFSP1Q12934 665 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 CUL4BQ13620 913 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 HSP90B2PQ58FF3 399 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 CEP135Q66GS9 1140 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 WDR73Q6P4I2 378 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 DCLRE1AQ6PJP8 1040 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 DENND5BQ6ZUT9 1274 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 HFE2Q6ZVN8 426 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 THAP5Q7Z6K1 395 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 SLFN11Q7Z7L1 901 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 NOSTRINQ8IVI9 506 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 RPAP2Q8IXW5 612 aaPredicted RBP7.4□□□□□ -1.23
SMCO1-201ENST00000397537 CHST13Q8NET6 341 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 IL17RDQ8NFM7 739 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 DENND1AQ8TEH3 1009 aa7.4□□□□□ -1.23
SMCO1-201ENST00000397537 SH3RF3Q8TEJ3 882 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms