RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 HS2ST1Q7LGA3 356 aa23.05■■□□□ 1.28
TSPAN4-206ENST00000397408 DDX53Q86TM3 631 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-206ENST00000397408 VPS52Q8N1B4 723 aa23.05■■□□□ 1.28
TSPAN4-206ENST00000397408 C18orf25Q96B23 403 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-206ENST00000397408 REV3LO60673 3130 aa23.05■■□□□ 1.28
TSPAN4-206ENST00000397408 GOLGA8IPA6NC78 632 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 GOLGA8JA6NMD2 632 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 FSCN2O14926 492 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 KIF4AO95239 1232 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 TMC7Q7Z402 723 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 ELOA2Q8IYF1 753 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 HASPINQ8TF76 798 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 SMARCE1Q969G3 411 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 RMND1Q9NWS8 449 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 TUBGCP4Q9UGJ1 667 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 PCDHA5Q9Y5H7 936 aa23.04■■□□□ 1.28
TSPAN4-206ENST00000397408 KIAA0391O15091 583 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 CLIC2O15247 247 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 EXTL3O43909 919 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 LDHAP00338 332 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 ADRB2P07550 413 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 CLCNKBP51801 687 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 SKIV2LQ15477 1246 aaKnown RBP23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 CD302Q8IX05 232 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 GPD1LQ8N335 351 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 UROC1Q96N76 676 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 GSDMAQ96QA5 445 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 ZBP1Q9H171 429 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 HSPBP1Q9NZL4 362 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 ADAM28Q9UKQ2 775 aa23.03■■□□□ 1.28
TSPAN4-206ENST00000397408 ANK1P16157 1881 aa23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 NFICP08651 508 aa23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 SNRPFP62306 86 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 POU5F1Q01860 360 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 JADE1Q6IE81 842 aa23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 PDE12Q6L8Q7 609 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 FUT10Q6P4F1 479 aa23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 ADGRD2Q7Z7M1 963 aa23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 BRSK2Q8IWQ3 736 aa23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 SPATA20Q8TB22 786 aa23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 NGRNQ9NPE2 291 aaKnown RBP23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 RBAKQ9NYW8 714 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 STK39Q9UEW8 545 aa23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 MAPK8IP1Q9UQF2 711 aa23.02■■□□□ 1.28
TSPAN4-206ENST00000397408 TULP1O00294 542 aaPredicted RBP23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 PODXLO00592 558 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 TADA2AO75478 443 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 KIF20AO95235 890 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 CA8P35219 290 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 CYP2J2P51589 502 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 SMC1AQ14683 1233 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 UPP1Q16831 310 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 SMYD4Q8IYR2 804 aaPredicted RBP23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 GOLGA5Q8TBA6 731 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 PPP2R3CQ969Q6 453 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 HERC2P3Q9BVR0 1158 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 KCTD10Q9H3F6 313 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 ASB7Q9H672 318 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 CGNQ9P2M7 1197 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 UBQLN1Q9UMX0 589 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 BRWD1Q9NSI6 2320 aa23.01■■□□□ 1.27
TSPAN4-206ENST00000397408 SF3B1O75533 1304 aaKnown RBP eCLIP23.01■■□□□ 1.273e-9■■■■■ 206.8
TSPAN4-206ENST00000397408 XPOTO43592 962 aaKnown RBP23■■□□□ 1.27
TSPAN4-206ENST00000397408 B3GAT3O94766 335 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 IL18RAPO95256 599 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 SOD2P04179 222 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 CTSAP10619 480 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 TMEM132DQ14C87 1099 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 C12orf56Q8IXR9 622 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 RNF168Q8IYW5 571 aaPredicted RBP23■■□□□ 1.27
TSPAN4-206ENST00000397408 TMEM130Q8N3G9 435 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 AUTS2Q8WXX7 1259 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 DDX27Q96GQ7 796 aaKnown RBP23■■□□□ 1.27
TSPAN4-206ENST00000397408 TSPAN18Q96SJ8 248 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 GPR62Q9BZJ7 368 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 LMBRD1Q9NUN5 540 aa23■■□□□ 1.27
TSPAN4-206ENST00000397408 HIDE1A8MVS5 230 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 TMEM189-UBE2V1I3L0A0 370 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 EFEMP2O95967 443 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 GUCY2FP51841 1108 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 WNT7BP56706 349 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 BMS1Q14692 1282 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 ZBTB6Q15916 424 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 DCLRE1AQ6PJP8 1040 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 TAS1R1Q7RTX1 841 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 CBWD2Q8IUF1 395 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 GUF1Q8N442 669 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 C3orf58Q8NDZ4 430 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 DERAQ9Y315 318 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 GOLGA6L22H0YM25 854 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 URODP06132 367 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 IGFBP6P24592 240 aaPredicted RBP22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 RPL9P32969 192 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 NRIP1P48552 1158 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 HYAL1Q12794 435 aa22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 ZNF658Q5TYW1 1059 aaPredicted RBP22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 RBM23Q86U06 439 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-206ENST00000397408 XXYLT1Q8NBI6 393 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms