RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 PLCB1Q9NQ66 1216 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 DMAC2Q9NW81 257 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 FRMD4BQ9Y2L6 1034 aa16.13■□□□□ 0.17
CAPN3-207ENST00000397200 ZNF263O14978 683 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 EVI5O60447 810 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 AKAP3O75969 853 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 NPTXRO95502 500 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 LDHAP00338 332 aaKnown RBP16.12■□□□□ 0.17
CAPN3-207ENST00000397200 KCNH2Q12809 1159 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 HSP90AA2PQ14568 343 aaPredicted RBP16.12■□□□□ 0.17
CAPN3-207ENST00000397200 GPNMBQ14956 572 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 ASTE1Q2TB18 679 aaPredicted RBP16.12■□□□□ 0.17
CAPN3-207ENST00000397200 HGSNATQ68CP4 663 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 GPD1LQ8N335 351 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 PDCL2Q8N4E4 241 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 APBB2Q92870 758 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 SAAL1Q96ER3 474 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 CARD6Q9BX69 1037 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 TRIM6Q9C030 488 aaPredicted RBP16.12■□□□□ 0.17
CAPN3-207ENST00000397200 MKI67P46013 3256 aaKnown RBP16.12■□□□□ 0.17
CAPN3-207ENST00000397200 GTPBP10A4D1E9 387 aaKnown RBP16.12■□□□□ 0.17
CAPN3-207ENST00000397200 CTAGE9A4FU28 777 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 GOLGA8IPA6NC78 632 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 GOLGA8JA6NMD2 632 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 RBAK-RBAKDNI3L0D1 243 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 OGTO15294 1046 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 EXTL3O43909 919 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 AFPP02771 609 aaKnown RBP16.12■□□□□ 0.17
CAPN3-207ENST00000397200 CXCL10P02778 98 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 ITGB8P26012 769 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 VAV2P52735 878 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 PLEKHG4Q58EX7 1191 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 MFSD5Q6N075 450 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 DEFB128Q7Z7B8 93 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 TMEM199Q8N511 208 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 NAPGQ99747 312 aaPredicted RBP16.12■□□□□ 0.17
CAPN3-207ENST00000397200 LSM14BQ9BX40 385 aaKnown RBP16.12■□□□□ 0.17
CAPN3-207ENST00000397200 FTHL17Q9BXU8 183 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 KIAA1586Q9HCI6 787 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 CDC23Q9UJX2 597 aa16.12■□□□□ 0.17
CAPN3-207ENST00000397200 IPO7O95373 1038 aaKnown RBP16.11■□□□□ 0.17
CAPN3-207ENST00000397200 EPB41P11171 864 aaKnown RBP16.11■□□□□ 0.17
CAPN3-207ENST00000397200 H2AFXP16104 143 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-207ENST00000397200 PSMC2P35998 433 aaKnown RBP16.11■□□□□ 0.17
CAPN3-207ENST00000397200 AMPD2Q01433 879 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 DSC3Q14574 896 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 FAM43BQ6ZT52 329 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-207ENST00000397200 RSRC2Q7L4I2 434 aaKnown RBP16.11■□□□□ 0.17
CAPN3-207ENST00000397200 RRAGAQ7L523 313 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 THNSL1Q8IYQ7 743 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 EHBP1Q8NDI1 1231 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 ZSWIM2Q8NEG5 633 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 MNS1Q8NEH6 495 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 DBF4BQ8NFT6 615 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 DPF3Q92784 378 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 SLC35C1Q96A29 364 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 JAKMIP2Q96AA8 810 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 FAM213AQ9BRX8 229 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 EIF2AQ9BY44 585 aaKnown RBP16.11■□□□□ 0.17
CAPN3-207ENST00000397200 TSGA10Q9BZW7 698 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.11■□□□□ 0.17
CAPN3-207ENST00000397200 FBXL5Q9UKA1 691 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 V9GYY5 206 aaPredicted RBP16.11■□□□□ 0.17
CAPN3-207ENST00000397200 TET1Q8NFU7 2136 aa16.11■□□□□ 0.17
CAPN3-207ENST00000397200 RCCD1A6NED2 376 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 KRT86O43790 486 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 MGEA5O60502 916 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 PLEKP08567 350 aaPredicted RBP16.1■□□□□ 0.17
CAPN3-207ENST00000397200 CASP4P49662 377 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 ACOT2P49753 483 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 KIF11P52732 1056 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 SNRNP35Q16560 246 aaKnown RBP16.1■□□□□ 0.17
CAPN3-207ENST00000397200 KYAT1Q16773 422 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 ERCC6LQ2NKX8 1250 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 UBXN11Q5T124 520 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 CACNA2D4Q7Z3S7 1137 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 FAM186BQ8IYM0 893 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 RDH13Q8NBN7 331 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 CCDC42Q96M95 316 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 FBXL18Q96ME1 805 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 ADAM2Q99965 735 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 TRIM10Q9UDY6 481 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 MYO6Q9UM54 1294 aa16.1■□□□□ 0.17
CAPN3-207ENST00000397200 ZNF233A6NK53 670 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 PJA2O43164 708 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 CSF2RAP15509 400 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 EIF4A3P38919 411 aaKnown RBP16.09■□□□□ 0.17
CAPN3-207ENST00000397200 RAB27AP51159 221 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 OSTNP61366 133 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 SEZ6Q53EL9 994 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 CCDC122Q5T0U0 273 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 KIAA1328Q86T90 577 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 CBWD2Q8IUF1 395 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 RPUSD2Q8IZ73 545 aaKnown RBP16.09■□□□□ 0.17
CAPN3-207ENST00000397200 LACRTQ9GZZ8 138 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 FAM105AQ9NUU6 356 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 AIPL1Q9NZN9 384 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 LTBP2Q14767 1821 aa16.09■□□□□ 0.17
CAPN3-207ENST00000397200 MAPK13O15264 365 aa16.08■□□□□ 0.17
CAPN3-207ENST00000397200 FAM189A1O60320 539 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms