RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 TUBGCP2Q9BSJ2 902 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 INO80BQ9C086 356 aaPredicted RBP14.41□□□□□ -0.1
SEC13-209ENST00000397117 PADI3Q9ULW8 664 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 TRPV2Q9Y5S1 764 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 EVPLQ92817 2033 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 A0A087WZ62 844 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 LRRC10BA6NIK2 292 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 N4BP3O15049 544 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 EXOC3O60645 756 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 CACNA1HO95180 2353 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 GLP2RO95838 553 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 PRKCBP05771 671 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 STAG3L1P0CL83 205 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 PSMC2P35998 433 aaKnown RBP14.41□□□□□ -0.1
SEC13-209ENST00000397117 NRIP1P48552 1158 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 GPC3P51654 580 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 COPB1P53618 953 aaKnown RBP14.41□□□□□ -0.1
SEC13-209ENST00000397117 ZXDAP98168 799 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 TMEM132AQ24JP5 1023 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 PAN2Q504Q3 1202 aaKnown RBP14.41□□□□□ -0.1
SEC13-209ENST00000397117 SLC9A9Q8IVB4 645 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 C12orf56Q8IXR9 622 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 KMT2EQ8IZD2 1858 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 ZNF710Q8N1W2 664 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 NME8Q8N427 588 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 POMGNT1Q8WZA1 660 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 PBXIP1Q96AQ6 731 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 NAP1L5Q96NT1 182 aaPredicted RBP14.41□□□□□ -0.1
SEC13-209ENST00000397117 FDXACB1Q9BRP7 624 aaPredicted RBP14.41□□□□□ -0.1
SEC13-209ENST00000397117 MRPL4Q9BYD3 311 aaKnown RBP14.41□□□□□ -0.1
SEC13-209ENST00000397117 VPS16Q9H269 839 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 TMX1Q9H3N1 280 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 PCIF1Q9H4Z3 704 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 TAB2Q9NYJ8 693 aa14.41□□□□□ -0.1
SEC13-209ENST00000397117 TISP43B9A030 160 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 ANKRD63C9JTQ0 380 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 MATR3P43243 847 aaKnown RBP eCLIP14.4□□□□□ -0.1
SEC13-209ENST00000397117 GATMP50440 423 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 TMEM62Q0P6H9 643 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 KIZQ2M2Z5 673 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 SLFN12LQ6IEE8 588 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.4□□□□□ -0.1
SEC13-209ENST00000397117 FRMD5Q7Z6J6 570 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 XXYLT1Q8NBI6 393 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 TMEM174Q8WUU8 243 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 CBWD1Q9BRT8 395 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 CELF4Q9BZC1 486 aaKnown RBP14.4□□□□□ -0.1
SEC13-209ENST00000397117 GCOM2Q9BZD3 368 aaPredicted RBP14.4□□□□□ -0.1
SEC13-209ENST00000397117 CCDC113Q9H0I3 377 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 IFT122Q9HBG6 1241 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 METTL14Q9HCE5 456 aaKnown RBP14.4□□□□□ -0.1
SEC13-209ENST00000397117 PRMT7Q9NVM4 692 aaPredicted RBP14.4□□□□□ -0.1
SEC13-209ENST00000397117 DMAC2Q9NW81 257 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 HSPBP1Q9NZL4 362 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 ARMCX3Q9UH62 379 aaPredicted RBP14.4□□□□□ -0.1
SEC13-209ENST00000397117 GINS2Q9Y248 185 aa14.4□□□□□ -0.1
SEC13-209ENST00000397117 USP15Q9Y4E8 981 aaPredicted RBP14.4□□□□□ -0.1
SEC13-209ENST00000397117 A0A1B0GTH6 734 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 ACKR2O00590 384 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 AKAP3O75969 853 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 PIGRP01833 764 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 GARTP22102 1010 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 CDC25BP30305 580 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 MBTD1Q05BQ5 628 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 PRPF4BQ13523 1007 aaKnown RBP14.39□□□□□ -0.11
SEC13-209ENST00000397117 HSP90AA2PQ14568 343 aaPredicted RBP14.39□□□□□ -0.11
SEC13-209ENST00000397117 ZPBP2Q6X784 338 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 APTXQ7Z2E3 356 aaKnown RBP14.39□□□□□ -0.11
SEC13-209ENST00000397117 SRGAP1Q7Z6B7 1085 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 RBM23Q86U06 439 aaKnown RBP14.39□□□□□ -0.11
SEC13-209ENST00000397117 IFNLR1Q8IU57 520 aaPredicted RBP14.39□□□□□ -0.11
SEC13-209ENST00000397117 FAM186BQ8IYM0 893 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 MKNK1Q9BUB5 465 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 TARS2Q9BW92 718 aaKnown RBP14.39□□□□□ -0.11
SEC13-209ENST00000397117 BARX2Q9UMQ3 279 aaPredicted RBP14.39□□□□□ -0.11
SEC13-209ENST00000397117 PCDHGC5Q9Y5F6 944 aa14.39□□□□□ -0.11
SEC13-209ENST00000397117 M0QZ92 97 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 ADSSP30520 456 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 CASP4P49662 377 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 PTPN5P54829 565 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 MARSP56192 900 aaKnown RBP14.38□□□□□ -0.11
SEC13-209ENST00000397117 PAK2Q13177 524 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 NR1I3Q14994 352 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 MAN2A1Q16706 1144 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 SLC39A4Q6P5W5 647 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 FAM43BQ6ZT52 329 aaPredicted RBP14.38□□□□□ -0.11
SEC13-209ENST00000397117 PRRX2Q99811 253 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 TCHPQ9BT92 498 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 PHF7Q9BWX1 381 aaPredicted RBP14.38□□□□□ -0.11
SEC13-209ENST00000397117 ADAMTS10Q9H324 1103 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 FZD8Q9H461 694 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
SEC13-209ENST00000397117 ANKFY1Q9P2R3 1169 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 USP20Q9Y2K6 914 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 MYO10Q9HD67 2058 aa14.38□□□□□ -0.11
SEC13-209ENST00000397117 GOLGA6L6A8MZA4 724 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 KIAA0391O15091 583 aaKnown RBP14.37□□□□□ -0.11
SEC13-209ENST00000397117 GPR32O75388 356 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 ERLIN2O94905 339 aa14.37□□□□□ -0.11
SEC13-209ENST00000397117 UBXN1Q04323 297 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms