RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 PRPF40AO75400 957 aaKnown RBP19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 LDHAP00338 332 aaKnown RBP19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 UPP1Q16831 310 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 KNOP1Q1ED39 458 aaKnown RBP19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 ARMCX5Q6P1M9 558 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 NELFCDQ8IXH7 590 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 VPS52Q8N1B4 723 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 ZSWIM2Q8NEG5 633 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 RABGGTAQ92696 567 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 SAAL1Q96ER3 474 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 ASB7Q9H672 318 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 GOLGA2P5Q9HBQ8 144 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 HOOK1Q9UJC3 728 aaKnown RBP19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 ADAM28Q9UKQ2 775 aa19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.34■□□□□ 0.69
TNFSF13-204ENST00000396542 EXTL3O43909 919 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 CSPG5O95196 566 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 KIF4AO95239 1232 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 CTSAP10619 480 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 CLCNKBP51801 687 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 TMC7Q7Z402 723 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 ADGRD2Q7Z7M1 963 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 C12orf56Q8IXR9 622 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 TMEM174Q8WUU8 243 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 C18orf25Q96B23 403 aaPredicted RBP19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 DDX27Q96GQ7 796 aaKnown RBP19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 GSDMAQ96QA5 445 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 FAM213AQ9BRX8 229 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 HERC2P3Q9BVR0 1158 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 ENTPD7Q9NQZ7 604 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 CGNQ9P2M7 1197 aaKnown RBP19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 DERAQ9Y315 318 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 IRAK3Q9Y616 596 aa19.33■□□□□ 0.68
TNFSF13-204ENST00000396542 HIDE1A8MVS5 230 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 SOD2P04179 222 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 CYP3A5P20815 502 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 RPL9P32969 192 aaKnown RBP19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 SPAG1Q07617 926 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 HYAL1Q12794 435 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 SMC1AQ14683 1233 aaKnown RBP19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 PLPP4Q5VZY2 271 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 FUT10Q6P4F1 479 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 DCLRE1AQ6PJP8 1040 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 CD300LGQ6UXG3 332 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 HS2ST1Q7LGA3 356 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 BRSK2Q8IWQ3 736 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 GPD1LQ8N335 351 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 MRPL43Q8N983 215 aaKnown RBP19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 MICAL1Q8TDZ2 1067 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 KIF12Q96FN5 646 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 FBXL18Q96ME1 805 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 KCTD10Q9H3F6 313 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 PCIF1Q9H4Z3 704 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 RMND1Q9NWS8 449 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 HSPBP1Q9NZL4 362 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 TUBGCP4Q9UGJ1 667 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 UBQLN1Q9UMX0 589 aaKnown RBP19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 PCDHA5Q9Y5H7 936 aa19.32■□□□□ 0.68
TNFSF13-204ENST00000396542 VWA8A3KMH1 1905 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 SF3B1O75533 1304 aaKnown RBP eCLIP19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 C2orf71A6NGG8 1288 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 TADA2AO75478 443 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 IL18RAPO95256 599 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 SMC2O95347 1197 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 JADE1Q6IE81 842 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 TAS1R1Q7RTX1 841 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 GUF1Q8N442 669 aaKnown RBP19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 C3orf58Q8NDZ4 430 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 GOLGA5Q8TBA6 731 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 PPP2R3CQ969Q6 453 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 GPR62Q9BZJ7 368 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 KIAA1586Q9HCI6 787 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 CHST7Q9NS84 486 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 RBAKQ9NYW8 714 aaPredicted RBP19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 C2CD2Q9Y426 696 aa19.31■□□□□ 0.68
TNFSF13-204ENST00000396542 GOLGA8IPA6NC78 632 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 GOLGA8JA6NMD2 632 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 PODXLO00592 558 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 PDXKO00764 312 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 NCK2O43639 380 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 LILRB3O75022 631 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 B3GAT3O94766 335 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 KIF20AO95235 890 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 NFICP08651 508 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 IGFBP6P24592 240 aaPredicted RBP19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 LRPAP1P30533 357 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 WNT7BP56706 349 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 BMS1Q14692 1282 aaKnown RBP19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 PTPN14Q15678 1187 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 CTC1Q2NKJ3 1217 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 SPATA1Q5VX52 437 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 GPR65Q8IYL9 337 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 HASPINQ8TF76 798 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 ERCC4Q92889 916 aaPredicted RBP19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 SMARCE1Q969G3 411 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 FAM212AQ96EL1 285 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 GBP4Q96PP9 640 aa19.3■□□□□ 0.68
TNFSF13-204ENST00000396542 BRWD1Q9NSI6 2320 aa19.29■□□□□ 0.68
TNFSF13-204ENST00000396542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.29■□□□□ 0.68
TNFSF13-204ENST00000396542 CLIC2O15247 247 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms