RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 AKAP3O75969 853 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 ALDH2P05091 517 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 CA3P07451 260 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 TNNI1P19237 187 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 CYP3A5P20815 502 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 DNAJB2P25686 324 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 PPM1AP35813 382 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 ANO6Q4KMQ2 910 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 GLRA4Q5JXX5 417 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 SPATA1Q5VX52 437 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 PPP2R2DQ66LE6 453 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 WDR49Q8IV35 697 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 GSTCDQ8NEC7 633 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 ENOX1Q8TC92 643 aaKnown RBP23.09■■□□□ 1.29
FXN-202ENST00000396364 TMC2Q8TDI7 906 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 TIFAQ96CG3 184 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 DDX27Q96GQ7 796 aaKnown RBP23.09■■□□□ 1.29
FXN-202ENST00000396364 ANKRD36BP1Q96IX9 119 aa23.09■■□□□ 1.29
FXN-202ENST00000396364 PPP1R10Q96QC0 940 aaKnown RBP23.09■■□□□ 1.29
FXN-202ENST00000396364 DUSP9Q99956 384 aaKnown RBP23.09■■□□□ 1.29
FXN-202ENST00000396364 SRRTQ9BXP5 876 aaKnown RBP23.09■■□□□ 1.29
FXN-202ENST00000396364 MRPL42Q9Y6G3 142 aaKnown RBP23.09■■□□□ 1.29
FXN-202ENST00000396364 TNNC2P02585 160 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 TMEM191BP0C7N4 346 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 DLATP10515 647 aaKnown RBP23.08■■□□□ 1.29
FXN-202ENST00000396364 CASP4P49662 377 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 JADE1Q6IE81 842 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 LRRC55Q6ZSA7 311 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 FRMD5Q7Z6J6 570 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 ZSWIM2Q8NEG5 633 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 CLP1Q92989 425 aaKnown RBP23.08■■□□□ 1.29
FXN-202ENST00000396364 CCDC127Q96BQ5 260 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 ZNF558Q96NG5 402 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 BPIFA3Q9BQP9 254 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 PDE11AQ9HCR9 933 aa23.08■■□□□ 1.29
FXN-202ENST00000396364 MAGEC2Q9UBF1 373 aaPredicted RBP23.08■■□□□ 1.29
FXN-202ENST00000396364 ARMCX3Q9UH62 379 aaPredicted RBP23.08■■□□□ 1.29
FXN-202ENST00000396364 TMEM265A0A087WTH1 108 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 LINC01553A4QN01 128 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 RPL9P32969 192 aaKnown RBP23.07■■□□□ 1.28
FXN-202ENST00000396364 VAMP7P51809 220 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 TFAMQ00059 246 aaKnown RBP23.07■■□□□ 1.28
FXN-202ENST00000396364 MYL5Q02045 173 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 BFSP1Q12934 665 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 DUOXA2Q1HG44 320 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 TGS1Q96RS0 853 aaKnown RBP23.07■■□□□ 1.28
FXN-202ENST00000396364 CGRRF1Q99675 332 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 COLEC11Q9BWP8 271 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 PLVAPQ9BX97 442 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 THAP9Q9H5L6 903 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 NRDE2Q9H7Z3 1164 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 MIOSQ9NXC5 875 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 STK39Q9UEW8 545 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 FAN1Q9Y2M0 1017 aa23.07■■□□□ 1.28
FXN-202ENST00000396364 LCHNA4D1U4 455 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 SMTNL1A8MU46 457 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 IKBKBO14920 756 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 RB1P06400 928 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 MYOGP15173 224 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 PBX2P40425 430 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 OR1G1P47890 313 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 ZNF165P49910 485 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 AFF1P51825 1210 aaKnown RBP23.06■■□□□ 1.28
FXN-202ENST00000396364 TPM4P67936 248 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 DSC1Q08554 894 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 C11orf57Q6ZUT1 292 aaPredicted RBP23.06■■□□□ 1.28
FXN-202ENST00000396364 COLGALT2Q8IYK4 626 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 PARD3BQ8TEW8 1205 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 ZMAT2Q96NC0 199 aaKnown RBP23.06■■□□□ 1.28
FXN-202ENST00000396364 FUCA2Q9BTY2 467 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 GZF1Q9H116 711 aaPredicted RBP23.06■■□□□ 1.28
FXN-202ENST00000396364 NKX2-4Q9H2Z4 354 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 CWH43Q9H720 699 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 YBX2Q9Y2T7 364 aaKnown RBP23.06■■□□□ 1.28
FXN-202ENST00000396364 NLRC5Q86WI3 1866 aa23.06■■□□□ 1.28
FXN-202ENST00000396364 BECN2A8MW95 431 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 NFICP08651 508 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 PAX3P23760 479 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 CTNNB1P35222 781 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 BCAR1P56945 870 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 SPAG1Q07617 926 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 KCNT2Q6UVM3 1135 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 ZNF280BQ86YH2 543 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 ANKRD20A12PQ8NF67 263 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 EEF2KMTQ96G04 330 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 INTS13Q9NVM9 706 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 PLAGL2Q9UPG8 496 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 NFE2L3Q9Y4A8 694 aa23.05■■□□□ 1.28
FXN-202ENST00000396364 MEFVO15553 781 aaPredicted RBP23.04■■□□□ 1.28
FXN-202ENST00000396364 DDHD2O94830 711 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 BMPR1AP36894 532 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 KRT17Q04695 432 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 ZBTB6Q15916 424 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 TCERG1LQ5VWI1 586 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 LRSAM1Q6UWE0 723 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 COLGALT1Q8NBJ5 622 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 TMEM169Q96HH4 297 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 C11orf84Q9BUA3 381 aaPredicted RBP23.04■■□□□ 1.28
FXN-202ENST00000396364 DPP3Q9NY33 737 aa23.04■■□□□ 1.28
FXN-202ENST00000396364 SPG21Q9NZD8 308 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms