RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 KSR1Q8IVT5 923 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 KLHDC9Q8NEP7 349 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 TRAPPC12Q8WVT3 735 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 ACCSQ96QU6 501 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 GBP3Q9H0R5 595 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 DMAC2Q9NW81 257 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 HCN2Q9UL51 889 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 TBX20Q9UMR3 447 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 ADGRA3Q8IWK6 1321 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 ASAP2O43150 1006 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 CBFA2T2O43439 604 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 ADAMTS4O75173 837 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 GNA14O95837 355 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 CD33P20138 364 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 RPL13P26373 211 aaKnown RBP12.47□□□□□ -0.41
RTN1-203ENST00000395090 CNGA1P29973 690 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 ADAM17P78536 824 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 POU5F1BQ06416 359 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 LAMTOR4Q0VGL1 99 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 GRIK4Q16099 956 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 KIAA0753Q2KHM9 967 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 MTHFD1LQ6UB35 978 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 MAP4K3Q8IVH8 894 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 ANKRD20A12PQ8NF67 263 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 PSPC1Q8WXF1 523 aaKnown RBP12.47□□□□□ -0.41
RTN1-203ENST00000395090 EEF2KMTQ96G04 330 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 GSX2Q9BZM3 304 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 SUGCTQ9HAC7 445 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 SPC25Q9HBM1 224 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 INTS13Q9NVM9 706 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 NXF1Q9UBU9 619 aaKnown RBP12.47□□□□□ -0.41
RTN1-203ENST00000395090 NRCAMQ92823 1304 aa12.47□□□□□ -0.41
RTN1-203ENST00000395090 DENND3A2RUS2 1198 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 MBLAC1A4D2B0 266 aaPredicted RBP12.46□□□□□ -0.41
RTN1-203ENST00000395090 MYADML2A6NDP7 307 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 CETN3O15182 167 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 NR3C1P04150 777 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 C6orf222P0C671 652 aaPredicted RBP12.46□□□□□ -0.41
RTN1-203ENST00000395090 FGFR3P22607 806 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 CST5P28325 142 aaPredicted RBP12.46□□□□□ -0.41
RTN1-203ENST00000395090 HOXC8P31273 242 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 DNM2P50570 870 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 PPFIA1Q13136 1202 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 ORC1Q13415 861 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 CAPSQ13938 189 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 CCSAPQ6IQ19 270 aaPredicted RBP12.46□□□□□ -0.41
RTN1-203ENST00000395090 HS2ST1Q7LGA3 356 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 C12orf56Q8IXR9 622 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 SYCP3Q8IZU3 236 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 KATNAL1Q9BW62 490 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 IKZF4Q9H2S9 585 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 AGPAT3Q9NRZ7 376 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 SUCLA2Q9P2R7 463 aaPredicted RBP12.46□□□□□ -0.41
RTN1-203ENST00000395090 MAGEC2Q9UBF1 373 aaPredicted RBP12.46□□□□□ -0.41
RTN1-203ENST00000395090 EXOC7Q9UPT5 735 aa12.46□□□□□ -0.41
RTN1-203ENST00000395090 ZEB2O60315 1214 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 PGK1P00558 417 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 TPM3P06753 285 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 MYL3P08590 195 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 SMIM10L2AP0DMW4 78 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 SMIM10L2BP0DMW5 78 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 NR2F2P24468 414 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 GRK4P32298 578 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 EFNA5P52803 228 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 COPB1P53618 953 aaKnown RBP12.45□□□□□ -0.42
RTN1-203ENST00000395090 ENOX2Q16206 610 aaKnown RBP12.45□□□□□ -0.42
RTN1-203ENST00000395090 CDCA2Q69YH5 1023 aaPredicted RBP12.45□□□□□ -0.42
RTN1-203ENST00000395090 LRRC71Q8N4P6 559 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 CNOT6LQ96LI5 555 aaKnown RBP12.45□□□□□ -0.42
RTN1-203ENST00000395090 TUBGCP2Q9BSJ2 902 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 KIFC3Q9BVG8 833 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 NFKBIZQ9BYH8 718 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 XPNPEP3Q9NQH7 507 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 SETD4Q9NVD3 440 aa12.45□□□□□ -0.42
RTN1-203ENST00000395090 DDX20Q9UHI6 824 aaKnown RBP12.45□□□□□ -0.42
RTN1-203ENST00000395090 K7ERI5 159 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 MSCO60682 206 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 SASH3O75995 380 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 PIGRP01833 764 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 TMOD1P28289 359 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 IGBP1P78318 339 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 SPEM2Q0P670 501 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 GRIN2CQ14957 1233 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 FILIP1LQ4L180 1135 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 FRMD5Q7Z6J6 570 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 KIAA0319LQ8IZA0 1049 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 METTL13Q8N6R0 699 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 DEPTORQ8TB45 409 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 LMBR1Q8WVP7 490 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 ZBTB10Q96DT7 871 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 BORCS6Q96GS4 357 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 MTG1Q9BT17 334 aaPredicted RBP12.44□□□□□ -0.42
RTN1-203ENST00000395090 ABI2Q9NYB9 513 aaPredicted RBP12.44□□□□□ -0.42
RTN1-203ENST00000395090 FOXD3Q9UJU5 478 aaPredicted RBP12.44□□□□□ -0.42
RTN1-203ENST00000395090 TRIM17Q9Y577 477 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 PTCH2Q9Y6C5 1203 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 STYXL1Q9Y6J8 313 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 N4BP3O15049 544 aa12.44□□□□□ -0.42
RTN1-203ENST00000395090 CLIC2O15247 247 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms