RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TDRD3Q9H7E2 651 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 KLC4Q9NSK0 619 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 IP6K2Q9UHH9 426 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 XPO7Q9UIA9 1087 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 SRPRBQ9Y5M8 271 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 RGS12O14924 1447 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 ZFYVE9O95405 1425 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 SNAP23O00161 211 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 POLRMTO00411 1230 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 SEMA3EO15041 775 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 DARSP14868 501 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 PRELPP51888 382 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 ARF5P84085 180 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 ALKBH2Q6NS38 261 aa12.88□□□□□ -0.35
SIN3A-202ENST00000394947 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.88□□□□□ -0.351e-6■■■■□ 20.2
SIN3A-202ENST00000394947 GPBP1L1Q9HC44 474 aaPredicted RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 TMA7Q9Y2S6 64 aaKnown RBP12.88□□□□□ -0.35
SIN3A-202ENST00000394947 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
SIN3A-202ENST00000394947 PHF20L1A8MW92 1017 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 HPCAP84074 193 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 DMPKQ09013 629 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 TAF5Q15542 800 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 MEI1Q5TIA1 1274 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 OTOAQ7RTW8 1153 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 OR8H2Q8N162 312 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 SLC44A5Q8NCS7 719 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 GOLPH3LQ9H4A5 285 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 PIH1D3Q9NQM4 214 aaKnown RBP12.87□□□□□ -0.35
SIN3A-202ENST00000394947 MAN1C1Q9NR34 630 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 ZFATQ9P243 1243 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 CCDC151A5D8V7 595 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 GSSP48637 474 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 SEPT2Q15019 361 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 RCSD1Q6JBY9 416 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 COMMD2Q86X83 199 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 ARHGEF38Q9NXL2 777 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 PI4KBQ9UBF8 816 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 SRP72O76094 671 aaKnown RBP12.87□□□□□ -0.35
SIN3A-202ENST00000394947 HIST1H2AGP0C0S8 130 aaPredicted RBP12.87□□□□□ -0.35
SIN3A-202ENST00000394947 HSMCR30P0CW71 290 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 PHKG2P15735 406 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 HIST1H2ADP20671 130 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 PGS1Q32NB8 556 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 GALNTL6Q49A17 601 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 ZMYM1Q5SVZ6 1142 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 HIST1H2AHQ96KK5 128 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 PANX2Q96RD6 677 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 HIST1H2AJQ99878 128 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 H2AFJQ9BTM1 129 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 PIN4Q9Y237 131 aaKnown RBP12.87□□□□□ -0.35
SIN3A-202ENST00000394947 LOC100653049A0A140TA62 436 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 KRT34O76011 436 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 RUNX1T1Q06455 604 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 TLK2Q86UE8 772 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 SGF29Q96ES7 293 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 OLFM3Q96PB7 478 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
SIN3A-202ENST00000394947 LOC102724428A0A0B4J2F2 783 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 AP3B1O00203 1094 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 NDUFS3O75489 264 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 TOMM70O94826 608 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 POU1F1P28069 291 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 SIK1P57059 783 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 ERAP2Q6P179 960 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 CDHR1Q96JP9 859 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 POLG2Q9UHN1 485 aa12.87□□□□□ -0.35
SIN3A-202ENST00000394947 ATMINO43313 823 aaPredicted RBP12.86□□□□□ -0.35
SIN3A-202ENST00000394947 SERPINB3P29508 390 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 ITPRIPL1Q6GPH6 555 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 CENPPQ6IPU0 288 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 CCT7Q99832 543 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 UNKQ9C0B0 810 aaKnown RBP12.86□□□□□ -0.35
SIN3A-202ENST00000394947 CAAP1Q9H8G2 361 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 NSMCE4AQ9NXX6 385 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 ATP6V1HQ9UI12 483 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 SPATA2Q9UM82 520 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 NEDD4P46934 1319 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 M0R3G1 203 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 CYP7B1O75881 506 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 CALB1P05937 261 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 RALAP11233 206 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 CHN1P15882 459 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 PRKCQQ04759 706 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 BFSP2Q13515 415 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 TCEA2Q15560 299 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 CNGA2Q16280 664 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 AMHR2Q16671 573 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
SIN3A-202ENST00000394947 LRRC8BQ6P9F7 803 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 SHCBP1Q8NEM2 672 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 PTPRN2Q92932 1015 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 PRPF18Q99633 342 aaKnown RBP12.86□□□□□ -0.35
SIN3A-202ENST00000394947 MRPL1Q9BYD6 325 aaKnown RBP12.86□□□□□ -0.35
SIN3A-202ENST00000394947 UTP6Q9NYH9 597 aaKnown RBP12.86□□□□□ -0.35
SIN3A-202ENST00000394947 PARD3Q8TEW0 1356 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 KLHL24Q6TFL4 600 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 PRPF39Q86UA1 669 aaKnown RBP12.86□□□□□ -0.35
SIN3A-202ENST00000394947 IPMKQ8NFU5 416 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 GLMNQ92990 594 aa12.86□□□□□ -0.35
SIN3A-202ENST00000394947 L3MBTL3Q96JM7 780 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms