RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 OSGEPQ9NPF4 335 aa13.28□□□□□ -0.28
SLC28A1-203ENST00000394573 BICDL2A1A5D9 508 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 IQCA1LA6NCM1 817 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 NDC80O14777 642 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 NOL4O94818 638 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 IFIT5Q13325 482 aaKnown RBP13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 PUS10Q3MIT2 529 aaKnown RBP13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 C4orf33Q8N1A6 199 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 RASGEF1CQ8N431 466 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 DDHD1Q8NEL9 900 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 NSL1Q96IY1 281 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 ZNF594Q96JF6 807 aaPredicted RBP13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 TMEM109Q9BVC6 243 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 CCSER1Q9C0I3 900 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 ALG13Q9NP73 1137 aaKnown RBP13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 DISC1Q9NRI5 854 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 DMTF1Q9Y222 760 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 NEU2Q9Y3R4 380 aa13.27□□□□□ -0.28
SLC28A1-203ENST00000394573 ATP5J2-PTCD1G3V325 749 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 STRNO43815 780 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 EDF1O60869 148 aaKnown RBP13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 PTCD1O75127 700 aaKnown RBP13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 TRPA1O75762 1119 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 RHOBTB3O94955 611 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 RARGP13631 454 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 CHKAP35790 457 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 PIK3CAP42336 1068 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 EPS15P42566 896 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 CTTNQ14247 550 aaKnown RBP13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 EFTUD2Q15029 972 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■■■■□ 23.5
SLC28A1-203ENST00000394573 SF3B4Q15427 424 aaKnown RBP eCLIP13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 MAN2A1Q16706 1144 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 ZNF423Q2M1K9 1284 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 ITPRIPL1Q6GPH6 555 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 SFR1Q86XK3 245 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 DCUN1D5Q9BTE7 237 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 THTPAQ9BU02 230 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 EPB41L1Q9H4G0 881 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 RRN3Q9NYV6 651 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 KANSL3Q9P2N6 904 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 NAALADL1Q9UQQ1 740 aa13.27□□□□□ -0.29
SLC28A1-203ENST00000394573 NEURL1BA8MQ27 555 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 NOTOA8MTQ0 251 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 WASLO00401 505 aaPredicted RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 TOM1O60784 492 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 FBXO21O94952 628 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 SEPT6Q14141 434 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 GCKRQ14397 625 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 GRAMD1BQ3KR37 738 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 TTC27Q6P3X3 843 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 RNF111Q6ZNA4 994 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 CROCCP2Q86T23 111 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 NT5DC3Q86UY8 548 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 TMIGD2Q96BF3 282 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 PAIP1Q9H074 479 aaKnown RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 SERPINA10Q9UK55 444 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 PCDHGA3Q9Y5H0 932 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 B2RBV5 119 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 GOLGA8TH3BQL2 631 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 GOLGA8HP0CJ92 632 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 PMLP29590 882 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 PHBP35232 272 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 SLC5A3P53794 718 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 FOLH1Q04609 750 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 SLC45A4Q5BKX6 768 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 ZNF571Q7Z3V5 609 aaPredicted RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 VPS50Q96JG6 964 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 FAM47DPA6NHR8 397 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 TMX2-CTNND1H3BSU7 103 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 PABPC1P11940 636 aaKnown RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 KCNA2P16389 499 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 ADORA1P30542 326 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 FOXD4Q12950 439 aaPredicted RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 NR1D2Q14995 579 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 TLR1Q15399 786 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 ASIC2Q16515 512 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 LRRC24Q50LG9 513 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 HSP90AA5PQ58FG0 334 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 CCSAPQ6IQ19 270 aaPredicted RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 LMBR1LQ6UX01 489 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 UNC13DQ70J99 1090 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 GSDMBQ8TAX9 411 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 GDPD5Q8WTR4 605 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 TMEM87BQ96K49 555 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 SERPINB12Q96P63 405 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 SLC39A3Q9BRY0 314 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 C12orf65Q9H3J6 166 aaKnown RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 EHD1Q9H4M9 534 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 PLGRKTQ9HBL7 147 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 ADAMTS6Q9UKP5 1117 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 TACC3Q9Y6A5 838 aa13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 V9GY48 417 aaPredicted RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 CLTCQ00610 1675 aaKnown RBP13.26□□□□□ -0.29
SLC28A1-203ENST00000394573 CAPN8A6NHC0 703 aa13.25□□□□□ -0.29
SLC28A1-203ENST00000394573 FAM47E-STBD1D6RA91 191 aa13.25□□□□□ -0.29
SLC28A1-203ENST00000394573 APOEP02649 317 aa13.25□□□□□ -0.29
SLC28A1-203ENST00000394573 C6orf222P0C671 652 aaPredicted RBP13.25□□□□□ -0.29
SLC28A1-203ENST00000394573 CDH3P22223 829 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms