RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 ZNF568Q3ZCX4 644 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 RHOT2Q8IXI1 618 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 ATP8B4Q8TF62 1192 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 SYT11Q9BT88 431 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 MRPL4Q9BYD3 311 aaKnown RBP11.93□□□□□ -0.5
TCOF1-203ENST00000394269 APOBEC3GQ9HC16 384 aaKnown RBP11.93□□□□□ -0.5
TCOF1-203ENST00000394269 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
TCOF1-203ENST00000394269 ANAPC7Q9UJX3 599 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 INTUQ9ULD6 942 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 NUB1Q9Y5A7 615 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 A0A0B4J269 797 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 RNF40O75150 1001 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 INSRRP14616 1297 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 ANXA13P27216 316 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 NSFP46459 744 aaKnown RBP11.93□□□□□ -0.5
TCOF1-203ENST00000394269 ZACNQ401N2 412 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 TSEN2Q8NCE0 465 aaKnown RBP11.93□□□□□ -0.5
TCOF1-203ENST00000394269 TRIM51Q9BSJ1 452 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 MINDY3Q9H8M7 445 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 KIAA1586Q9HCI6 787 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 KCNG1Q9UIX4 513 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 KCNH4Q9UQ05 1017 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 BTNL10A8MVZ5 291 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 MAPK13O15264 365 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 DAPK3O43293 454 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 VNN1O95497 513 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 SCP2P22307 547 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 FGFR4P22455 802 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 RRM1P23921 792 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 MYL6P60660 151 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 PSMD6Q15008 389 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 PRAMEF19Q5SWL8 479 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 IER5Q5VY09 327 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 SCFD2Q8WU76 684 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 MROH8Q9H579 483 aa11.93□□□□□ -0.5
TCOF1-203ENST00000394269 A0A0A6YYK5 440 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 CELF2O95319 508 aaKnown RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 LDHAP00338 332 aaKnown RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 C4BPAP04003 597 aaKnown RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 TMEM191BP0C7N4 346 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 IBSPP21815 317 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 MAPK4P31152 587 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 TARBP2Q15633 366 aaKnown RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 DCAF12L1Q5VU92 463 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 EEF1DP3Q658K8 133 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 TTC19Q6DKK2 380 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 MAATS1Q7Z4T9 603 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 UBL4BQ8N7F7 174 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 HES6Q96HZ4 224 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 CPB2Q96IY4 423 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 FAM167AQ96KS9 214 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 FAM49AQ9H0Q0 323 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 SMARCAD1Q9H4L7 1026 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 FAM204AQ9H8W3 233 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 NENFQ9UMX5 172 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 COQ4Q9Y3A0 265 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 BRCA1P38398 1863 aaKnown RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 MYH9P35579 1960 aaKnown RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 IGKV6D-21A0A0A0MT36 114 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 TOM1L1O75674 476 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 CD19P15391 556 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 YY1P25490 414 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 GNA15P30679 374 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 MOGSQ13724 837 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 ZC3H15Q8WU90 426 aaKnown RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 ISCUQ9H1K1 167 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 PNMA3Q9UL41 463 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 A0A0C4DFX4 3053 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 A0A087WZ62 844 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 IQCA1LA6NCM1 817 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 KRT14P02533 472 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 TMOD1P28289 359 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 EPHB4P54760 987 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 CCNA1P78396 465 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 SNX1Q13596 522 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 CUL2Q13617 745 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 SLFN11Q7Z7L1 901 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 NLRP7Q8WX94 980 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 FAM118BQ9BPY3 351 aa11.92□□□□□ -0.5
TCOF1-203ENST00000394269 FDXACB1Q9BRP7 624 aaPredicted RBP11.92□□□□□ -0.5
TCOF1-203ENST00000394269 MSCO60682 206 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 HSF2BPO75031 334 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 KCNJ1P48048 391 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 PAK2Q13177 524 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 MXD4Q14582 209 aaPredicted RBP11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ATF7IP2Q5U623 682 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 CCDC50Q8IVM0 306 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ACTRT1Q8TDG2 376 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 HEMGNQ9BXL5 484 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ERVK-5Q9HDB9 667 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 BCCIPQ9P287 314 aaKnown RBP eCLIP11.91□□□□□ -0.5
TCOF1-203ENST00000394269 STXBP5LQ9Y2K9 1186 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 CEP290O15078 2479 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 ASB14A6NK59 587 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 CXCL8P10145 99 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 PYGMP11217 842 aa11.91□□□□□ -0.5
TCOF1-203ENST00000394269 EFNA5P52803 228 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms