RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 PPM1KQ8N3J5 372 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 NEK9Q8TD19 979 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 PBKQ96KB5 322 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 PAIP2Q9BPZ3 127 aaKnown RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 GORASP1Q9BQQ3 440 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 EHMT1Q9H9B1 1298 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 TMEM165Q9HC07 324 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 DNAJC17Q9NVM6 304 aaKnown RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 FRMPD4Q14CM0 1322 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 SUN1O94901 812 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 DLATP10515 647 aaKnown RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 ALDH3A1P30838 453 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 YWHABP31946 246 aaKnown RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 BFSP1Q12934 665 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 BNIP1Q12981 228 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 LONRF1Q17RB8 773 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 BMT2Q1RMZ1 405 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 MUM1Q2TAK8 710 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 C2CD6Q53TS8 623 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 NBPF12Q5TAG4 269 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 CBWD2Q8IUF1 395 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 RTKN2Q8IZC4 609 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 FBXO25Q8TCJ0 367 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 CLEC4DQ8WXI8 215 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 UTP4Q969X6 686 aaKnown RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 ATG4CQ96DT6 458 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 NUDCD1Q96RS6 583 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 EPB41L4BQ9H329 900 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 OCEL1Q9H607 264 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 SMAPO00193 183 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 SLC16A3O15427 465 aaKnown RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 ICAM1P05362 532 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 GBP1P32455 592 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 PDE6CP51160 858 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 JAM2P57087 298 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 CNGA2Q16280 664 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 ARHGEF16Q5VV41 709 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 HAUS6Q7Z4H7 955 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 GALNT15Q8N3T1 639 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 PLEKHO2Q8TD55 490 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 SYTL5Q8TDW5 730 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 ATP8B4Q8TF62 1192 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 CTNNBL1Q8WYA6 563 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 JDP2Q8WYK2 163 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 CENPTQ96BT3 561 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 UBE2OQ9C0C9 1292 aaKnown RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 RPAP3Q9H6T3 665 aaPredicted RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 ARHGEF3Q9NR81 526 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 METTL5Q9NRN9 209 aaKnown RBP10.63□□□□□ -0.71
PSEN1-204ENST00000394164 HAO1Q9UJM8 370 aa10.63□□□□□ -0.71
PSEN1-204ENST00000394164 hCG_2014768A0A024R1R8 64 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 LIN7AO14910 233 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 DHX15O43143 795 aaKnown RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 ENTPD5O75356 428 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 GM2AP17900 193 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 KCNA3P22001 575 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 SP100P23497 879 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 GCLCP48506 637 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 RARRES1P49788 294 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 BAATQ14032 418 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 LRRC23Q53EV4 343 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 SPATA21Q7Z572 469 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 FAM160B2Q86V87 743 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 PI4K2AQ9BTU6 479 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 ERVK-5Q9HDB9 667 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 CTTNBP2NLQ9P2B4 639 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 LARSQ9P2J5 1176 aaKnown RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 CTNNAL1Q9UBT7 734 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 APEX2Q9UBZ4 518 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 ANKRD63C9JTQ0 380 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 CCNE2O96020 404 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 P4HBP07237 508 aaKnown RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 PTGER2P43116 358 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 QARSP47897 775 aaKnown RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 CUL3Q13618 768 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 STXBP4Q6ZWJ1 553 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 LRRC57Q8N9N7 239 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 DHX38Q92620 1227 aaKnown RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 DDX50Q9BQ39 737 aaKnown RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 GPR88Q9GZN0 384 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 AGO4Q9HCK5 861 aaKnown RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 HSPBP1Q9NZL4 362 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 WDR35Q9P2L0 1181 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 COG5Q9UP83 839 aa10.62□□□□□ -0.71
PSEN1-204ENST00000394164 BZW2Q9Y6E2 419 aaKnown RBP10.62□□□□□ -0.71
PSEN1-204ENST00000394164 EIF3DO15371 548 aaKnown RBP eCLIP10.61□□□□□ -0.71
PSEN1-204ENST00000394164 VCAM1P19320 739 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 MARCKSL1P49006 195 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 VAMP7P51809 220 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 HMGCS2P54868 508 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 DR1Q01658 176 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 KLC1Q07866 573 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 MGAT5Q09328 741 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 MESDQ14696 234 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 GALNTL6Q49A17 601 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 CIAPIN1Q6FI81 312 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 RNF207Q6ZRF8 634 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 CYFIP1Q7L576 1253 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 VSIG1Q86XK7 387 aa10.61□□□□□ -0.71
PSEN1-204ENST00000394164 SLC30A5Q8TAD4 765 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms