RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 HS2ST1Q7LGA3 356 aa20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 KIAA0895Q8NCT3 520 aa20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 KIF12Q96FN5 646 aa20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 PAAF1Q9BRP4 392 aa20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 CBWD1Q9BRT8 395 aa20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 FAM213AQ9BRX8 229 aa20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 RMND1Q9NWS8 449 aa20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 CGNQ9P2M7 1197 aaKnown RBP20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 CACNG4Q9UBN1 327 aa20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 ADAM28Q9UKQ2 775 aa20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.66■□□□□ 0.9
PDLIM7-204ENST00000393546 TGFB1I1O43294 461 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 XPOTO43592 962 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 NCK2O43639 380 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 EXTL3O43909 919 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 CTSAP10619 480 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 RPL9P32969 192 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 CA8P35219 290 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 SPAG1Q07617 926 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 CRELD2Q6UXH1 353 aaPredicted RBP20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 MRPL43Q8N983 215 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 NOC3LQ8WTT2 800 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 C18orf25Q96B23 403 aaPredicted RBP20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 SAAL1Q96ER3 474 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 ZBP1Q9H171 429 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 ASB7Q9H672 318 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 TLE6Q9H808 572 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 GOLGA2P5Q9HBQ8 144 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 PCDHGC5Q9Y5F6 944 aa20.65■□□□□ 0.9
PDLIM7-204ENST00000393546 GOLGA8IPA6NC78 632 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 GOLGA8JA6NMD2 632 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 F8W810 466 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 B3GAT3O94766 335 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 IL18RAPO95256 599 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 SOD2P04179 222 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 CLCNKBP51801 687 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 SOX4Q06945 474 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 UPP1Q16831 310 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 FUT10Q6P4F1 479 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 RBM23Q86U06 439 aaKnown RBP20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 GPD1LQ8N335 351 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 GOLGA5Q8TBA6 731 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 GBP4Q96PP9 640 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 GSDMAQ96QA5 445 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 VN1R3Q9BXE9 311 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 IGFLR1Q9H665 355 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 KIAA1586Q9HCI6 787 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 AGPAT3Q9NRZ7 376 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 HSPBP1Q9NZL4 362 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 UBQLN1Q9UMX0 589 aaKnown RBP20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 SSX2IPQ9Y2D8 614 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 DERAQ9Y315 318 aa20.64■□□□□ 0.89
PDLIM7-204ENST00000393546 SF3B1O75533 1304 aaKnown RBP eCLIP20.63■□□□□ 0.894e-7■■■■■ 44.1
PDLIM7-204ENST00000393546 TMEM189-UBE2V1I3L0A0 370 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 TULP1O00294 542 aaPredicted RBP20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 CLIC2O15247 247 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 KIF4AO95239 1232 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 CYP3A5P20815 502 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 NRIP1P48552 1158 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 HYAL1Q12794 435 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 ZBTB6Q15916 424 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 JADE1Q6IE81 842 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 KIAA1841Q6NSI8 718 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 TAS1R1Q7RTX1 841 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 ADGRD2Q7Z7M1 963 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 BEST2Q8NFU1 509 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 HLA-CQ95604 372 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 SMARCE1Q969G3 411 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 CDCA3Q99618 268 aaPredicted RBP20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 HERC2P3Q9BVR0 1158 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 COG5Q9UP83 839 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 PCDHA5Q9Y5H7 936 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 ATG2AQ2TAZ0 1938 aa20.63■□□□□ 0.89
PDLIM7-204ENST00000393546 C2orf71A6NGG8 1288 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 ZNF233A6NK53 670 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 HIDE1A8MVS5 230 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 PODXLO00592 558 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 EFEMP2O95967 443 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 ELAVL2Q12926 359 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 TMEM132DQ14C87 1099 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 USP41Q3LFD5 358 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 BRSK2Q8IWQ3 736 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 RNF168Q8IYW5 571 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 ZSWIM2Q8NEG5 633 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 HASPINQ8TF76 798 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 GTPBP4Q9BZE4 634 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 GPR62Q9BZJ7 368 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 PRDM6Q9NQX0 595 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 MRPL17Q9NRX2 175 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 RBAKQ9NYW8 714 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 IRAK3Q9Y616 596 aa20.62■□□□□ 0.89
PDLIM7-204ENST00000393546 COL6A3P12111 3177 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 PDCD11Q14690 1871 aaKnown RBP20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 FSD2A1L4K1 749 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 PDXKO00764 312 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 PER2O15055 1255 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 TRAPPC3O43617 180 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 URODP06132 367 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 CYP2J2P51589 502 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms