RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 ANGPTL2Q9UKU9 493 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 SLC8A2Q9UPR5 921 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 NPEPPSP55786 919 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 ERVK-24P63145 666 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 ATF7IP2Q5U623 682 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 NIF3L1Q9GZT8 377 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 ALG6Q9Y672 507 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 KIF1AQ12756 1690 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 SLC4A1P02730 911 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 GIT2Q14161 759 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 FSCBQ5H9T9 825 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 PARK7Q99497 189 aaKnown RBP13.36□□□□□ -0.27
CLTC-202ENST00000393043 FBXO28Q9NVF7 368 aa13.36□□□□□ -0.27
CLTC-202ENST00000393043 APOBEC2Q9Y235 224 aaKnown RBP13.36□□□□□ -0.27
CLTC-202ENST00000393043 PIN4Q9Y237 131 aaKnown RBP13.36□□□□□ -0.27
CLTC-202ENST00000393043 MYO1CO00159 1063 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 LMNAP02545 664 aaKnown RBP13.35□□□□□ -0.27
CLTC-202ENST00000393043 PRLRP16471 622 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 ANKRD13AQ8IZ07 590 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 TGS1Q96RS0 853 aaKnown RBP13.35□□□□□ -0.27
CLTC-202ENST00000393043 FAM129AQ9BZQ8 928 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 CARD9Q9H257 536 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 KIF9Q9HAQ2 790 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 IL17RBQ9NRM6 502 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 GTF3C4Q9UKN8 822 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 SMAPO00193 183 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 COMTP21964 271 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 HSPA9P38646 679 aaKnown RBP13.35□□□□□ -0.27
CLTC-202ENST00000393043 MYBPC2Q14324 1141 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 TRIM65Q6PJ69 517 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 TBC1D1Q86TI0 1168 aaPredicted RBP13.35□□□□□ -0.27
CLTC-202ENST00000393043 NAGPAQ9UK23 515 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.35□□□□□ -0.27
CLTC-202ENST00000393043 CFAP69A5D8W1 941 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 SPECC1L-ADORA2AF8WAN1 911 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 CD4P01730 458 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 ACTR2P61160 394 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 COPS2P61201 443 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 C3orf67Q6ZVT6 689 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 MYLK4Q86YV6 388 aaPredicted RBP13.35□□□□□ -0.27
CLTC-202ENST00000393043 TMEM117Q9H0C3 514 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 PPARGC1AQ9UBK2 798 aaKnown RBP13.35□□□□□ -0.27
CLTC-202ENST00000393043 SNX9Q9Y5X1 595 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
CLTC-202ENST00000393043 PPP1R37O75864 691 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 PDGFRAP16234 1089 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 PON1P27169 355 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 GTF2H1P32780 548 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 SARSP49591 514 aaKnown RBP13.35□□□□□ -0.27
CLTC-202ENST00000393043 ISCUQ9H1K1 167 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 UBN1Q9NPG3 1134 aa13.35□□□□□ -0.27
CLTC-202ENST00000393043 CDH16O75309 829 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 SKIP12755 728 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 AP1B1Q10567 949 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 E2F5Q15329 346 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 TRIM67Q6ZTA4 783 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 APPL2Q8NEU8 664 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 CYTH2Q99418 400 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 PRKAG2Q9UGJ0 569 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 AP3B1O00203 1094 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 TNPO2O14787 897 aaKnown RBP13.34□□□□□ -0.27
CLTC-202ENST00000393043 C1orf228Q6PIY5 440 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 ELMSAN1Q6PJG2 1045 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 SAMD7Q7Z3H4 446 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 FAM83AQ86UY5 434 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 JAMLQ86YT9 394 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 MED15Q96RN5 788 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 TRIM51Q9BSJ1 452 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 VPS11Q9H270 941 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 HPCAL4Q9UM19 191 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 DDTLA6NHG4 134 aaPredicted RBP13.34□□□□□ -0.27
CLTC-202ENST00000393043 RAD51CO43502 376 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 FGFR4P22455 802 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 MDM2Q00987 491 aaPredicted RBP13.34□□□□□ -0.27
CLTC-202ENST00000393043 CENPCQ03188 943 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 NME3Q13232 169 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 LAMC2Q13753 1193 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 AGBL2Q5U5Z8 902 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 LRRC37BQ96QE4 947 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 OSBPL8Q9BZF1 889 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 ZFP69BQ9UJL9 534 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 ZC3H11AO75152 810 aaKnown RBP eCLIP13.34□□□□□ -0.279e-8■□□□□ 11.3
CLTC-202ENST00000393043 SHMT1P34896 483 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 HSP90AA5PQ58FG0 334 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 ZC3H18Q86VM9 953 aaKnown RBP13.34□□□□□ -0.27
CLTC-202ENST00000393043 EPAS1Q99814 870 aa13.34□□□□□ -0.27
CLTC-202ENST00000393043 SMG5Q9UPR3 1016 aaKnown RBP13.34□□□□□ -0.27
CLTC-202ENST00000393043 APOEP02649 317 aa13.33□□□□□ -0.27
CLTC-202ENST00000393043 MDH1P40925 334 aaKnown RBP13.33□□□□□ -0.27
CLTC-202ENST00000393043 GPRC5AQ8NFJ5 357 aa13.33□□□□□ -0.27
CLTC-202ENST00000393043 TPCN2Q8NHX9 752 aa13.33□□□□□ -0.27
CLTC-202ENST00000393043 PPWD1Q96BP3 646 aaKnown RBP13.33□□□□□ -0.27
CLTC-202ENST00000393043 IFT43Q96FT9 208 aa13.33□□□□□ -0.27
CLTC-202ENST00000393043 MCEEQ96PE7 176 aa13.33□□□□□ -0.27
CLTC-202ENST00000393043 NT5C1AQ9BXI3 368 aa13.33□□□□□ -0.27
CLTC-202ENST00000393043 FIS1Q9Y3D6 152 aa13.33□□□□□ -0.27
CLTC-202ENST00000393043 GYG2O15488 501 aa13.33□□□□□ -0.28
CLTC-202ENST00000393043 SSTR3P32745 418 aaPredicted RBP13.33□□□□□ -0.28
CLTC-202ENST00000393043 BTBD8Q5XKL5 378 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms