RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 CYP26A1O43174 497 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 PEX19P40855 299 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 DLG4P78352 724 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 SLMAPQ14BN4 828 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 BMT2Q1RMZ1 405 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 C2CD6Q53TS8 623 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 PHLDB3Q6NSJ2 640 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 SLFN11Q7Z7L1 901 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 C3orf20Q8ND61 904 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 KCNV2Q8TDN2 545 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 NSMCE1Q8WV22 266 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 ATG4AQ8WYN0 398 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 PRCCQ92733 491 aaPredicted RBP11.58□□□□□ -0.56
BRF1-204ENST00000392557 BICD1Q96G01 975 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 CTNNAL1Q9UBT7 734 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 SEL1LQ9UBV2 794 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 USTQ9Y2C2 406 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 AGTP01019 485 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 CREB1P16220 341 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 JAM2P57087 298 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 PSMC5P62195 406 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 KCNJ2P63252 427 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 KYNUQ16719 465 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 EPC2Q52LR7 807 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 TRIM68Q6AZZ1 485 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 EP400NLQ6ZTU2 488 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 VSIG1Q86XK7 387 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 PRELID2Q8N945 189 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 NSUN6Q8TEA1 469 aaKnown RBP11.58□□□□□ -0.56
BRF1-204ENST00000392557 KLRG1Q96E93 195 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 FIZ1Q96SL8 496 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 CEP83Q9Y592 693 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 RPTORQ8N122 1335 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 BRAFP15056 766 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 BFSP1Q12934 665 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 EMC10Q5UCC4 262 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 FOXR2Q6PJQ5 311 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 ZNF564Q8TBZ8 553 aaPredicted RBP11.57□□□□□ -0.56
BRF1-204ENST00000392557 PLVAPQ9BX97 442 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 TEX13BQ9BXU2 312 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 A1CFQ9NQ94 594 aaKnown RBP11.57□□□□□ -0.56
BRF1-204ENST00000392557 DIS3Q9Y2L1 958 aaKnown RBP11.57□□□□□ -0.56
BRF1-204ENST00000392557 IGF2BP3O00425 579 aaKnown RBP eCLIP11.57□□□□□ -0.56
BRF1-204ENST00000392557 DIAPH2O60879 1101 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 SGPL1O95470 568 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 DSG3P32926 999 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 LACTBP83111 547 aaPredicted RBP11.57□□□□□ -0.56
BRF1-204ENST00000392557 CNTN2Q02246 1040 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 MTERF2Q49AM1 385 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 MOB2Q70IA6 237 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 NCAPG2Q86XI2 1143 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 ZSWIM1Q9BR11 485 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 MYH11P35749 1972 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 MIF4GDA9UHW6 222 aaKnown RBP11.57□□□□□ -0.56
BRF1-204ENST00000392557 ANKRD63C9JTQ0 380 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 RIPK2O43353 540 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 KRT17Q04695 432 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 SUPT20HL1Q3ZLR7 823 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 TTC27Q6P3X3 843 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 ZNF365Q70YC5 407 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 INTS8Q75QN2 995 aaKnown RBP11.57□□□□□ -0.56
BRF1-204ENST00000392557 CYFIP1Q7L576 1253 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 P3H4Q92791 437 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 TLCD1Q96CP7 247 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 OTUD5Q96G74 571 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 PWWP2AQ96N64 755 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 RUNDC3BQ96NL0 473 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 ACCSQ96QU6 501 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 ACAD9Q9H845 621 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 RNF181Q9P0P0 153 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 KLHL14Q9P2G3 628 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 MCM8Q9UJA3 840 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 ZNF214Q9UL59 606 aaPredicted RBP11.57□□□□□ -0.56
BRF1-204ENST00000392557 PCDHA10Q9Y5I2 948 aa11.57□□□□□ -0.56
BRF1-204ENST00000392557 PLS3P13797 630 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 ANXA13P27216 316 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 ZNF131P52739 623 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 ATP11AP98196 1134 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 KRT76Q01546 638 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 PPP2R5AQ15172 486 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 TREML2Q5T2D2 321 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 B3GNT9Q6UX72 402 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 ARHGEF19Q8IW93 802 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 SULF1Q8IWU6 871 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 ELP3Q9H9T3 547 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 USP15Q9Y4E8 981 aaPredicted RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 SRRM3A6NNA2 597 aaPredicted RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 ANP32DO95626 131 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 PAX7P23759 505 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 COILP38432 576 aaPredicted RBP11.56□□□□□ -0.56
BRF1-204ENST00000392557 MMP13P45452 471 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 MXI1P50539 228 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 RWDD2BP57060 319 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 XRCC4Q13426 336 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 VGLL4Q14135 290 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 VSIG10LQ86VR7 867 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 FAM228AQ86W67 206 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 IFT74Q96LB3 600 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 C9orf72Q96LT7 481 aa11.56□□□□□ -0.56
BRF1-204ENST00000392557 TGS1Q96RS0 853 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms