RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 GSPT2Q8IYD1 628 aaKnown RBP20.35■□□□□ 0.85
CCDC50-202ENST00000392456 RDH13Q8NBN7 331 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 AGPAT5Q9NUQ2 364 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 DMAC2Q9NW81 257 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 A0A0U1RQJ8 604 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 KDM7AQ6ZMT4 941 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 STXBP4Q6ZWJ1 553 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 TAS1R3Q7RTX0 852 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 PLPPR4Q7Z2D5 763 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 ATRIPQ8WXE1 791 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 ABHD16BQ9H3Z7 469 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 ST6GALNAC4Q9H4F1 302 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 TBX20Q9UMR3 447 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 SIK3Q9Y2K2 1263 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 ASB3Q9Y575 518 aa20.35■□□□□ 0.85
CCDC50-202ENST00000392456 UBE4BO95155 1302 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 ANKRD63C9JTQ0 380 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 GH1P01241 217 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 ZNF286BP0CG31 522 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 GLRA2P23416 452 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 AMPD2Q01433 879 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 KCNMA1Q12791 1236 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 LAMC2Q13753 1193 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 HS2ST1Q7LGA3 356 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 APLFQ8IW19 511 aaPredicted RBP20.34■□□□□ 0.85
CCDC50-202ENST00000392456 ARL10Q8N8L6 244 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 SLC7A3Q8WY07 619 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 ERGIC2Q96RQ1 377 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 OSBPL1AQ9BXW6 950 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 L3MBTL1Q9Y468 752 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 DPPA5A6NC42 116 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 GNA14O95837 355 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 GJA8P48165 433 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 ATP1A2P50993 1020 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 RAD9BQ6WBX8 426 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 ATP8B4Q8TF62 1192 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 RNPC3Q96LT9 517 aaKnown RBP20.34■□□□□ 0.85
CCDC50-202ENST00000392456 ACCSQ96QU6 501 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 TTYH3Q9C0H2 523 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 ZWILCHQ9H900 591 aa20.34■□□□□ 0.85
CCDC50-202ENST00000392456 ARMCX3Q9UH62 379 aaPredicted RBP20.34■□□□□ 0.85
CCDC50-202ENST00000392456 EMSYQ7Z589 1322 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 CA12O43570 354 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 RPL13P26373 211 aaKnown RBP20.33■□□□□ 0.85
CCDC50-202ENST00000392456 ADSSP30520 456 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 SEC24CP53992 1094 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 KCNH2Q12809 1159 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 FKBP15Q5T1M5 1219 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 EMC10Q5UCC4 262 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 SDR16C5Q8N3Y7 309 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 LRRC71Q8N4P6 559 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 SPIRE2Q8WWL2 714 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 FAM207AQ9NSI2 230 aaPredicted RBP20.33■□□□□ 0.85
CCDC50-202ENST00000392456 C2CD2Q9Y426 696 aa20.33■□□□□ 0.85
CCDC50-202ENST00000392456 RBAK-RBAKDNI3L0D1 243 aa20.33■□□□□ 0.84
CCDC50-202ENST00000392456 NPTXRO95502 500 aa20.33■□□□□ 0.84
CCDC50-202ENST00000392456 LGALS2P05162 132 aa20.33■□□□□ 0.84
CCDC50-202ENST00000392456 CNGA1P29973 690 aa20.33■□□□□ 0.84
CCDC50-202ENST00000392456 ARL2P36404 184 aa20.33■□□□□ 0.84
CCDC50-202ENST00000392456 DUSP28Q4G0W2 176 aa20.33■□□□□ 0.84
CCDC50-202ENST00000392456 FRMD5Q7Z6J6 570 aa20.33■□□□□ 0.84
CCDC50-202ENST00000392456 AENQ8WTP8 325 aaKnown RBP20.33■□□□□ 0.84
CCDC50-202ENST00000392456 HHIPL1Q96JK4 782 aa20.33■□□□□ 0.84
CCDC50-202ENST00000392456 PCMTD1Q96MG8 357 aaPredicted RBP20.33■□□□□ 0.84
CCDC50-202ENST00000392456 NAA15Q9BXJ9 866 aaKnown RBP20.33■□□□□ 0.84
CCDC50-202ENST00000392456 TNPO2O14787 897 aaKnown RBP20.32■□□□□ 0.84
CCDC50-202ENST00000392456 MAP3K13O43283 966 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 DIAPH2O60879 1101 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 HOXC6P09630 235 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 ALDH3A1P30838 453 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 KRT9P35527 623 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 GUCY1A3Q02108 690 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 PABPC1LQ4VXU2 614 aaKnown RBP20.32■□□□□ 0.84
CCDC50-202ENST00000392456 SLC39A4Q6P5W5 647 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 PPTC7Q8NI37 304 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 PPP1R13LQ8WUF5 828 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 CYFIP2Q96F07 1278 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 SMARCAD1Q9H4L7 1026 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 TMEM206Q9H813 350 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 MAFO75444 373 aaPredicted RBP20.32■□□□□ 0.84
CCDC50-202ENST00000392456 GJB1P08034 283 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 MYBL1P10243 752 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 DYNC1I2Q13409 638 aaKnown RBP20.32■□□□□ 0.84
CCDC50-202ENST00000392456 NFIL3Q16649 462 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 DCAF17Q5H9S7 520 aaPredicted RBP20.32■□□□□ 0.84
CCDC50-202ENST00000392456 GPIHBP1Q8IV16 184 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 ZNF668Q96K58 619 aaPredicted RBP20.32■□□□□ 0.84
CCDC50-202ENST00000392456 MMRN2Q9H8L6 949 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 C17orf75Q9HAS0 396 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 ABHD10Q9NUJ1 306 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 SPATA7Q9P0W8 599 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 ARHGAP28Q9P2N2 729 aa20.32■□□□□ 0.84
CCDC50-202ENST00000392456 ZNF189O75820 626 aaPredicted RBP20.31■□□□□ 0.84
CCDC50-202ENST00000392456 TRIM21P19474 475 aaKnown RBP20.31■□□□□ 0.84
CCDC50-202ENST00000392456 RTP1P59025 263 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 MAP4K3Q8IVH8 894 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 FAM186BQ8IYM0 893 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 SLC35C1Q96A29 364 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 C16orf70Q9BSU1 422 aa20.31■□□□□ 0.84
CCDC50-202ENST00000392456 FAM184BQ9ULE4 1060 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms