RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 DDHD2O94830 711 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 ARHGEF15O94989 841 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 CXCL8P10145 99 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 HOXB3P14651 431 aaPredicted RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 RPL9P32969 192 aaKnown RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 OR1G1P47890 313 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 ACOT2P49753 483 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 GPM6BQ13491 265 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 MORC3Q14149 939 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 BMS1Q14692 1282 aaKnown RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 GRIN2CQ14957 1233 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 NAB2Q15742 525 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 ZBTB6Q15916 424 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 ENOX2Q16206 610 aaKnown RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 CAMK4Q16566 473 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 PTPROQ16827 1216 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 EDRF1Q3B7T1 1238 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 CENPPQ6IPU0 288 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 PDE12Q6L8Q7 609 aaKnown RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 DCLRE1AQ6PJP8 1040 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 CRELD2Q6UXH1 353 aaPredicted RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 ZNF280BQ86YH2 543 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 COLGALT2Q8IYK4 626 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 ADSSL1Q8N142 457 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 SLC39A11Q8N1S5 342 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 KLHL23Q8NBE8 558 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 SPPL3Q8TCT6 385 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 CACTINQ8WUQ7 758 aaKnown RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 MARVELD3Q96A59 401 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 TMEM169Q96HH4 297 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 DHTKD1Q96HY7 919 aaPredicted RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 IGSF21Q96ID5 467 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 PPP1R10Q96QC0 940 aaKnown RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 CBWD1Q9BRT8 395 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 FAM213AQ9BRX8 229 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 ANP32EQ9BTT0 268 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 COLEC11Q9BWP8 271 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 PCIF1Q9H4Z3 704 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 DMAC2Q9NW81 257 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 HSPBP1Q9NZL4 362 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 MAN1B1Q9UKM7 699 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 UBQLN1Q9UMX0 589 aaKnown RBP7.35□□□□□ -1.23
UBBP1-201ENST00000392399 PLAGL2Q9UPG8 496 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 C2CD2Q9Y426 696 aa7.35□□□□□ -1.23
UBBP1-201ENST00000392399 LACTBL1A8MY62 500 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 TISP43B9A030 160 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 TMEM189-UBE2V1I3L0A0 370 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 STK25O00506 426 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 CLIC2O15247 247 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 MAPK13O15264 365 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 TRAPPC3O43617 180 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 EXOC3O60645 756 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 ITGB1P05556 798 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 CCNE1P24864 410 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 TNFSF9P41273 254 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 PRCPP42785 496 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 SLC11A1P49279 550 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 LRRC63Q05C16 580 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 ENPEPQ07075 957 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 ELAVL2Q12926 359 aaKnown RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 NFKBIBQ15653 356 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 SNRNP35Q16560 246 aaKnown RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 CT47A1Q5JQC4 288 aaPredicted RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 SPATA1Q5VX52 437 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 USP37Q86T82 979 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 DDX53Q86TM3 631 aaKnown RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 BRSK2Q8IWQ3 736 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 GPR65Q8IYL9 337 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 MLKLQ8NB16 471 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 BEST2Q8NFU1 509 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 GPT2Q8TD30 523 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 ERCC4Q92889 916 aaPredicted RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 MRPL38Q96DV4 380 aaKnown RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 SAAL1Q96ER3 474 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 ZMAT2Q96NC0 199 aaKnown RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 CDX2Q99626 313 aaPredicted RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 TSG101Q99816 390 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 IKZF4Q9H2S9 585 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 PRDM12Q9H4Q4 367 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 CERS4Q9HA82 394 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 NGRNQ9NPE2 291 aaKnown RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 RBAKQ9NYW8 714 aaPredicted RBP7.34□□□□□ -1.23
UBBP1-201ENST00000392399 DNAJB4Q9UDY4 337 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 MTUS1Q9ULD2 1270 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 MAPK8IP1Q9UQF2 711 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 SSX2IPQ9Y2D8 614 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 FRMD4BQ9Y2L6 1034 aa7.34□□□□□ -1.23
UBBP1-201ENST00000392399 GBF1Q92538 1859 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 BICDL2A1A5D9 508 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 FSD2A1L4K1 749 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 GOLGA8IPA6NC78 632 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 GOLGA8JA6NMD2 632 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 NT5C1B-RDH14C9J2C7 533 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 CETN3O15182 167 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 MEFVO15553 781 aaPredicted RBP7.33□□□□□ -1.24
UBBP1-201ENST00000392399 LPXNO60711 386 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 TADA2AO75478 443 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 B3GAT3O94766 335 aa7.33□□□□□ -1.24
UBBP1-201ENST00000392399 NR3C1P04150 777 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms