RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 CSDE1O75534 798 aaKnown RBP22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 OSBPP22059 807 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 GTF2H1P32780 548 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 TNNC1P63316 161 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 GLE1Q53GS7 698 aaKnown RBP22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 RHPN2Q8IUC4 686 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 CPA5Q8WXQ8 436 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 MED4Q9NPJ6 270 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 GDF3Q9NR23 364 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 STYXL1Q9Y6J8 313 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 UMODL1Q5DID0 1318 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 A0A0B4J269 797 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 GRIN3BO60391 1043 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 CFHP08603 1231 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 OSTNP61366 133 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 ERVK-9P63128 1117 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 IGBP1P78318 339 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 CDR2Q01850 454 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 ZACNQ401N2 412 aa22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 APOBEC3GQ9HC16 384 aaKnown RBP22.8■■□□□ 1.24
SPTBN4-203ENST00000392023 CLDN3O15551 220 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 ATP8B3O60423 1300 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 RFC5P40937 340 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 LAMTOR4Q0VGL1 99 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 WDR44Q5JSH3 913 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 RHOT2Q8IXI1 618 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 AFAP1L1Q8TED9 768 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 ZNF653Q96CK0 615 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 SLC10A4Q96EP9 437 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 NUP85Q9BW27 656 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 MAF1Q9H063 256 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 TRPC6Q9Y210 931 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 DNAJC25-GNG10A0A024R161 153 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 CES2O00748 559 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 COMTP21964 271 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 MAP1SQ66K74 1059 aaPredicted RBP22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 FASTKD5Q7L8L6 764 aaKnown RBP22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 VTI1AQ96AJ9 217 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 RNPC3Q96LT9 517 aaKnown RBP22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 NLRP4Q96MN2 994 aa22.79■■□□□ 1.24
SPTBN4-203ENST00000392023 EPHB4P54760 987 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 PLCB4Q15147 1175 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 ARMC9Q7Z3E5 817 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 PASD1Q8IV76 773 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 EFCAB13Q8IY85 973 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 TMEM130Q8N3G9 435 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 RASGEF1CQ8N431 466 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 VIPAS39Q9H9C1 493 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 KIAA1586Q9HCI6 787 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 EVPLQ92817 2033 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 RNF40O75150 1001 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 CST3P01034 146 aaPredicted RBP22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 SATB1Q01826 763 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 SLFN12LQ6IEE8 588 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 TRIM7Q9C029 511 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 RNPEPQ9H4A4 650 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 ERVK-5Q9HDB9 667 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 SUFUQ9UMX1 484 aa22.78■■□□□ 1.24
SPTBN4-203ENST00000392023 MSCO60682 206 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 GZMAP12544 262 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 CLCN3P51790 818 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 CLDN10P78369 228 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 CNPY4Q8N129 248 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 ACBD3Q9H3P7 528 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 ADGRA2Q96PE1 1338 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 CNTNAP2Q9UHC6 1331 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 GOLGA6BA6NDN3 693 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 TTI1O43156 1089 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 GCNT1Q02742 428 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 HLTFQ14527 1009 aaKnown RBP eCLIP22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 CCDC62Q6P9F0 684 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 TMEM270Q6UE05 265 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 ZNF564Q8TBZ8 553 aaPredicted RBP22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 TRIM31Q9BZY9 425 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 NUB1Q9Y5A7 615 aa22.77■■□□□ 1.24
SPTBN4-203ENST00000392023 B4GALT5O43286 388 aa22.76■■□□□ 1.23
SPTBN4-203ENST00000392023 TAF1DQ9H5J8 278 aaPredicted RBP22.76■■□□□ 1.23
SPTBN4-203ENST00000392023 PIGRP01833 764 aa22.76■■□□□ 1.23
SPTBN4-203ENST00000392023 MAP2K2P36507 400 aa22.76■■□□□ 1.23
SPTBN4-203ENST00000392023 DAB2IPQ5VWQ8 1189 aa22.76■■□□□ 1.23
SPTBN4-203ENST00000392023 CEP120Q8N960 986 aa22.76■■□□□ 1.23
SPTBN4-203ENST00000392023 L3MBTL3Q96JM7 780 aaPredicted RBP22.76■■□□□ 1.23
SPTBN4-203ENST00000392023 TMEM134Q9H6X4 195 aa22.76■■□□□ 1.23
SPTBN4-203ENST00000392023 SNAPC2Q13487 334 aa22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 THNSL1Q8IYQ7 743 aa22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 MSL3Q8N5Y2 521 aaKnown RBP22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 FAM71BQ8TC56 605 aa22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 ATP8B4Q8TF62 1192 aa22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 ZC3H15Q8WU90 426 aaKnown RBP22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 CYFIP2Q96F07 1278 aa22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 FAM204AQ9H8W3 233 aa22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 CNOT8Q9UFF9 292 aaKnown RBP22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 PCDHB4Q9Y5E5 795 aa22.75■■□□□ 1.23
SPTBN4-203ENST00000392023 ACAD10Q6JQN1 1059 aa22.74■■□□□ 1.23
SPTBN4-203ENST00000392023 ARMCX2Q7L311 632 aa22.74■■□□□ 1.23
SPTBN4-203ENST00000392023 MPHOSPH6Q99547 160 aaKnown RBP22.74■■□□□ 1.23
SPTBN4-203ENST00000392023 INO80B-WBP1J3KQ70 363 aa22.74■■□□□ 1.23
SPTBN4-203ENST00000392023 LDHAP00338 332 aaKnown RBP22.74■■□□□ 1.23
SPTBN4-203ENST00000392023 PRKCBP05771 671 aa22.74■■□□□ 1.23
SPTBN4-203ENST00000392023 AARSP49588 968 aaKnown RBP eCLIP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms