RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 APOBEC3GQ9HC16 384 aaKnown RBP20.49■□□□□ 0.87
ERCC2-203ENST00000391944 UVRAGQ9P2Y5 699 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 FGGP02679 453 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 MCL1Q07820 350 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 NNTQ13423 1086 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 RHPN2Q8IUC4 686 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 FAM71BQ8TC56 605 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 TRAPPC12Q8WVT3 735 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ZNF653Q96CK0 615 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 NUP85Q9BW27 656 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 CHORDC1Q9UHD1 332 aaPredicted RBP20.48■□□□□ 0.87
ERCC2-203ENST00000391944 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ABLIM1O14639 778 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 OGTO15294 1046 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ATMINO43313 823 aaPredicted RBP20.48■□□□□ 0.87
ERCC2-203ENST00000391944 UNGP13051 313 aaPredicted RBP20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ARHGAP1Q07960 439 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 PAK2Q13177 524 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 LAMC2Q13753 1193 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 TAPT1Q6NXT6 567 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ZBTB33Q86T24 672 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ZNF564Q8TBZ8 553 aaPredicted RBP20.48■□□□□ 0.87
ERCC2-203ENST00000391944 CASKIN2Q8WXE0 1202 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ALG3Q92685 438 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 RNPC3Q96LT9 517 aaKnown RBP20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ZNF408Q9H9D4 720 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ERAP1Q9NZ08 941 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 PLXNA1Q9UIW2 1896 aa20.48■□□□□ 0.87
ERCC2-203ENST00000391944 ITGA4P13612 1032 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 ADORA2AP29274 412 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 TNFSF9P41273 254 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 NCOA4Q13772 614 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 TFDP1Q14186 410 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 MESDQ14696 234 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 CLUL1Q15846 466 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 WDR49Q8IV35 697 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 UBL4BQ8N7F7 174 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 EIF1ADQ8N9N8 165 aaKnown RBP20.47■□□□□ 0.87
ERCC2-203ENST00000391944 NAP1L3Q99457 506 aaPredicted RBP20.47■□□□□ 0.87
ERCC2-203ENST00000391944 DDX47Q9H0S4 455 aaKnown RBP20.47■□□□□ 0.87
ERCC2-203ENST00000391944 FZD8Q9H461 694 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 PLEKHA4Q9H4M7 779 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 SLITRK6Q9H5Y7 841 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 NFU1Q9UMS0 254 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 ESYT3A0FGR9 886 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 BTBD19C9JJ37 291 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 ASAP2O43150 1006 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 PHACTR2O75167 634 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 CALCAP01258 141 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 CLTAP09496 248 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 COMTP21964 271 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 TBXAS1P24557 533 aaPredicted RBP20.47■□□□□ 0.87
ERCC2-203ENST00000391944 GTF2A2P52657 109 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 EFCAB12Q6NXP0 572 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 ABRAQ8N0Z2 381 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 IFT81Q8WYA0 676 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 RNPEPQ9H4A4 650 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 VTA1Q9NP79 307 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 CNTN6Q9UQ52 1028 aa20.47■□□□□ 0.87
ERCC2-203ENST00000391944 BHMG1C9JSJ3 638 aaPredicted RBP20.46■□□□□ 0.87
ERCC2-203ENST00000391944 ACKR2O00590 384 aa20.46■□□□□ 0.87
ERCC2-203ENST00000391944 STRNO43815 780 aa20.46■□□□□ 0.87
ERCC2-203ENST00000391944 SYF2O95926 243 aaKnown RBP20.46■□□□□ 0.87
ERCC2-203ENST00000391944 POTEJP0CG39 1038 aa20.46■□□□□ 0.87
ERCC2-203ENST00000391944 PROZP22891 400 aa20.46■□□□□ 0.87
ERCC2-203ENST00000391944 MAP1SQ66K74 1059 aaPredicted RBP20.46■□□□□ 0.87
ERCC2-203ENST00000391944 TSHZ1Q6ZSZ6 1077 aa20.46■□□□□ 0.87
ERCC2-203ENST00000391944 ZBTB9Q96C00 473 aa20.46■□□□□ 0.87
ERCC2-203ENST00000391944 ZSWIM1Q9BR11 485 aa20.46■□□□□ 0.87
ERCC2-203ENST00000391944 WNT8AQ9H1J5 351 aa20.46■□□□□ 0.87
ERCC2-203ENST00000391944 CPSF3Q9UKF6 684 aaKnown RBP20.46■□□□□ 0.87
ERCC2-203ENST00000391944 NUB1Q9Y5A7 615 aa20.46■□□□□ 0.87
ERCC2-203ENST00000391944 CCL15-CCL14A0A0B4J2E2 113 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 TMEM110-MUSTN1A8MSY1 372 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 PEX5P50542 639 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 NOP14P78316 857 aaKnown RBP20.45■□□□□ 0.87
ERCC2-203ENST00000391944 SURF1Q15526 300 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 GPR162Q16538 588 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 CCL15Q16663 113 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.45■□□□□ 0.87
ERCC2-203ENST00000391944 CD101Q93033 1021 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 PTPRHQ9HD43 1115 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 MORF4L1Q9UBU8 362 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 CNOT8Q9UFF9 292 aaKnown RBP20.45■□□□□ 0.87
ERCC2-203ENST00000391944 PLXNB2O15031 1838 aa20.45■□□□□ 0.87
ERCC2-203ENST00000391944 RBM47A0AV96 593 aaKnown RBP20.45■□□□□ 0.86
ERCC2-203ENST00000391944 GCLCP48506 637 aaPredicted RBP20.45■□□□□ 0.86
ERCC2-203ENST00000391944 ZNF484Q5JVG2 852 aa20.45■□□□□ 0.86
ERCC2-203ENST00000391944 MAMDC4Q6UXC1 1216 aa20.45■□□□□ 0.86
ERCC2-203ENST00000391944 MAATS1Q7Z4T9 603 aa20.45■□□□□ 0.86
ERCC2-203ENST00000391944 CCDC26Q8TAB7 109 aa20.45■□□□□ 0.86
ERCC2-203ENST00000391944 KRT35Q92764 455 aa20.45■□□□□ 0.86
ERCC2-203ENST00000391944 PCDHB4Q9Y5E5 795 aa20.45■□□□□ 0.86
ERCC2-203ENST00000391944 EVPLQ92817 2033 aa20.44■□□□□ 0.86
ERCC2-203ENST00000391944 AGPSO00116 658 aa20.44■□□□□ 0.86
ERCC2-203ENST00000391944 GH1P01241 217 aa20.44■□□□□ 0.86
ERCC2-203ENST00000391944 CYP1A1P04798 512 aaPredicted RBP20.44■□□□□ 0.86
ERCC2-203ENST00000391944 GJB1P08034 283 aa20.44■□□□□ 0.86
ERCC2-203ENST00000391944 PTENP60484 403 aa20.44■□□□□ 0.86
ERCC2-203ENST00000391944 PPP2R5EQ16537 467 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms