RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.6□□□□□ -1.83
TRAJ40-201ENST00000390497 hCG_1642624A0A1W2PR95 340 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 KLRG2A4D1S0 409 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 TCAF2A6NFQ2 919 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 LRRC14BA6NHZ5 514 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 NT5C1B-RDH14C9J2C7 533 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 F5H423 210 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 F2RL2O00254 374 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 ARHGAP6O43182 974 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 TBC1D4O60343 1298 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 SASH1O94885 1247 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 FARP2O94887 1054 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 SNRPA1P09661 255 aaKnown RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 BRAFP15056 766 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 TYRP1P17643 537 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 EN2P19622 333 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 STT3AP46977 705 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 PIK3CGP48736 1102 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 PRIM2P49643 509 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 HGFACQ04756 655 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 DLX2Q07687 328 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 ZNF543Q08ER8 600 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 MRPL49Q13405 166 aaKnown RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 RAPGEF1Q13905 1077 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 AMOTQ4VCS5 1084 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 INO80DQ53TQ3 878 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 FAM209BQ5JX69 171 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 SWSAP1Q6NVH7 229 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 RALYLQ86SE5 291 aaKnown RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 PDSS2Q86YH6 399 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 PLXDC1Q8IUK5 500 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 LILRA3Q8N6C8 439 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 OR6B3Q8NGW1 331 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 ADAMTS17Q8TE56 1095 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 ZNF526Q8TF50 670 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 STON2Q8WXE9 905 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 NMD3Q96D46 503 aaKnown RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 SLC38A3Q99624 504 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 EIF2AQ9BY44 585 aaKnown RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 WDR12Q9GZL7 423 aaKnown RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 SIK2Q9H0K1 926 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 C11orf54Q9H0W9 315 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 NELFAQ9H3P2 528 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 BRD9Q9H8M2 597 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 RSAD1Q9HA92 442 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 KCNK12Q9HB15 430 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 RGS17Q9UGC6 210 aaPredicted RBP3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 CPA4Q9UI42 421 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 PCDHA6Q9UN73 950 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 CLCA2Q9UQC9 943 aa3.59□□□□□ -1.83
TRAJ40-201ENST00000390497 MROH6A6NGR9 719 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 B5MCH6 92 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 HNRNPDLO14979 420 aaKnown RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 HOXA3O43365 443 aaPredicted RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 SLC43A1O75387 559 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 AMHP03971 560 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 GNAI2P04899 355 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 PARP1P09874 1014 aaKnown RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 KITP10721 976 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 ALAS1P13196 640 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 ALOX15P16050 662 aaPredicted RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 TNFSF4P23510 183 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 CASRP41180 1078 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 PPM1FP49593 454 aaPredicted RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 ARFIP2P53365 341 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 RRADP55042 308 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 SUMO3P55854 103 aaPredicted RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 DAG1Q14118 895 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 SURF1Q15526 300 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 ARL13BQ3SXY8 428 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 VWA3BQ502W6 1294 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 PRAMEF14Q5SWL7 426 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 PGBD2Q6P3X8 592 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 ZNF783Q6ZMS7 281 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 ATG14Q6ZNE5 492 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 SEM1Q6ZVN7 128 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 BEND5Q7L4P6 421 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 PLEKHH3Q7Z736 793 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 ZGPATQ8N5A5 531 aaKnown RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 LINC01356Q8N9X3 169 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 IPCEF1Q8WWN9 437 aaPredicted RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 TNPO1Q92973 898 aaKnown RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 DACT3Q96B18 629 aaPredicted RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 RPL10LQ96L21 214 aaKnown RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 MRGPRX1Q96LB2 322 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 NT5C1BQ96P26 610 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 TCF25Q9BQ70 676 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 BRIP1Q9BX63 1249 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 ENKD1Q9H0I2 346 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 VPS11Q9H270 941 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 PPCSQ9HAB8 311 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 PTPRHQ9HD43 1115 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 AFF4Q9UHB7 1163 aaKnown RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 SMG5Q9UPR3 1016 aaKnown RBP3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 MED16Q9Y2X0 877 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 NR2E1Q9Y466 385 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 CEP83Q9Y592 693 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 ACTL7AQ9Y615 435 aa3.58□□□□□ -1.84
TRAJ40-201ENST00000390497 SLC4A7Q9Y6M7 1214 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms