RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRAV3-201ENST00000390425 ARHGAP28Q9P2N2 729 aa12.14□□□□□ -0.47
TRAV3-201ENST00000390425 MTRRQ9UBK8 725 aa12.14□□□□□ -0.47
TRAV3-201ENST00000390425 WNT16Q9UBV4 365 aa12.14□□□□□ -0.47
TRAV3-201ENST00000390425 TNFSF13BQ9Y275 285 aa12.14□□□□□ -0.47
TRAV3-201ENST00000390425 NUMBLQ9Y6R0 609 aa12.14□□□□□ -0.47
TRAV3-201ENST00000390425 GPR179Q6PRD1 2367 aa12.14□□□□□ -0.47
TRAV3-201ENST00000390425 CEP250Q9BV73 2442 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 SMIM28A0A1B0GU29 152 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 CCL16O15467 120 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 HNRNPA1P09651 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRAV3-201ENST00000390425 PROZP22891 400 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 FSHRP23945 695 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 HOXA9P31269 272 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 GRM5P41594 1212 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 BRCC3P46736 316 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 GNL2Q13823 731 aaKnown RBP12.13□□□□□ -0.47
TRAV3-201ENST00000390425 PDIA5Q14554 519 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 ZNF568Q3ZCX4 644 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 LIN9Q5TKA1 542 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 ALKAL1Q6UXT8 129 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 DTWD2Q8NBA8 298 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 SLC7A14Q8TBB6 771 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 NXPE3Q969Y0 559 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 ZMAT2Q96NC0 199 aaKnown RBP12.13□□□□□ -0.47
TRAV3-201ENST00000390425 ACO2Q99798 780 aaKnown RBP12.13□□□□□ -0.47
TRAV3-201ENST00000390425 RTP3Q9BQQ7 232 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 TBC1D17Q9HA65 648 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 SLC2A4RGQ9NR83 387 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.13□□□□□ -0.47
TRAV3-201ENST00000390425 HCFC1R1Q9NWW0 138 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 TICRRQ7Z2Z1 1910 aa12.13□□□□□ -0.47
TRAV3-201ENST00000390425 CACNA1AO00555 2505 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 K7ERI5 159 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 HIP1RO75146 1068 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 B3GAT3O94766 335 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 POU2F2P09086 479 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 OR1D2P34982 312 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 OSTNP61366 133 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 ANGPT1Q15389 498 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 PPM1LQ5SGD2 360 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
TRAV3-201ENST00000390425 RINT1Q6NUQ1 792 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 DCLRE1AQ6PJP8 1040 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 POTEHQ6S545 545 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 PARM1Q6UWI2 310 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 C1orf186Q6ZWK4 172 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 ITFG1Q8TB96 612 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 FGF13Q92913 245 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 SNX27Q96L92 541 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 PNMA5Q96PV4 448 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 TARS2Q9BW92 718 aaKnown RBP12.12□□□□□ -0.47
TRAV3-201ENST00000390425 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 ARHGEF3Q9NR81 526 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 DLGAP2Q9P1A6 1054 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 CDH7Q9ULB5 785 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 CDY1Q9Y6F8 540 aa12.12□□□□□ -0.47
TRAV3-201ENST00000390425 DMXL1Q9Y485 3027 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 CCDC169A6NNP5 214 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 SFI1A8K8P3 1242 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 PRPHP41219 470 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 ROR1Q01973 937 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 DMP1Q13316 513 aaPredicted RBP12.11□□□□□ -0.47
TRAV3-201ENST00000390425 KRT79Q5XKE5 535 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 PDXDC1Q6P996 788 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 NPAS3Q8IXF0 933 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 TMEM130Q8N3G9 435 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 ZBTB45Q96K62 511 aaPredicted RBP12.11□□□□□ -0.47
TRAV3-201ENST00000390425 UROC1Q96N76 676 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 CCDC94Q9BW85 323 aaPredicted RBP12.11□□□□□ -0.47
TRAV3-201ENST00000390425 MRPL4Q9BYD3 311 aaKnown RBP12.11□□□□□ -0.47
TRAV3-201ENST00000390425 RAB34Q9BZG1 259 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 KMT5AQ9NQR1 393 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 DNMT3BQ9UBC3 853 aaKnown RBP12.11□□□□□ -0.47
TRAV3-201ENST00000390425 POLIQ9UNA4 740 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 DNM3Q9UQ16 869 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 BACE2Q9Y5Z0 518 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 ZFP37Q9Y6Q3 630 aaPredicted RBP12.11□□□□□ -0.47
TRAV3-201ENST00000390425 SCN1AP35498 2009 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 TCHHQ07283 1943 aa12.11□□□□□ -0.47
TRAV3-201ENST00000390425 LAD1O00515 517 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 SLC16A4O15374 487 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 TBC1D4O60343 1298 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 CD2BP2O95400 341 aaKnown RBP12.1□□□□□ -0.47
TRAV3-201ENST00000390425 MCF2P10911 925 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 GLULP15104 373 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 KCNE1P15382 129 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 GPC5P78333 572 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 ATP2C1P98194 919 aaPredicted RBP12.1□□□□□ -0.47
TRAV3-201ENST00000390425 SLC5A9Q2M3M2 681 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 VARS2Q5ST30 1063 aaKnown RBP12.1□□□□□ -0.47
TRAV3-201ENST00000390425 HYIQ5T013 277 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 SLC8B1Q6J4K2 584 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 PHLDB3Q6NSJ2 640 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 MPZL3Q6UWV2 235 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 ANKS3Q6ZW76 656 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 LRRC15Q8TF66 581 aa12.1□□□□□ -0.47
TRAV3-201ENST00000390425 NKD2Q969F2 451 aaPredicted RBP12.1□□□□□ -0.47
TRAV3-201ENST00000390425 C18orf25Q96B23 403 aaPredicted RBP12.1□□□□□ -0.47
TRAV3-201ENST00000390425 DRC1Q96MC2 740 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms