RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 PARK7Q99497 189 aaKnown RBP19.53■□□□□ 0.72
ACTN4-202ENST00000390009 APOBEC3GQ9HC16 384 aaKnown RBP19.53■□□□□ 0.72
ACTN4-202ENST00000390009 MGAMO43451 1857 aa19.53■□□□□ 0.72
ACTN4-202ENST00000390009 ANK1P16157 1881 aa19.53■□□□□ 0.72
ACTN4-202ENST00000390009 INO80B-WBP1J3KQ70 363 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 PGRMC1O00264 195 aaKnown RBP19.52■□□□□ 0.72
ACTN4-202ENST00000390009 ACKR2O00590 384 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 SNAI1O95863 264 aaPredicted RBP19.52■□□□□ 0.72
ACTN4-202ENST00000390009 CUL2Q13617 745 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 GRB14Q14449 540 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 SMC1AQ14683 1233 aaKnown RBP19.52■□□□□ 0.72
ACTN4-202ENST00000390009 ZNF484Q5JVG2 852 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 RASGEF1CQ8N431 466 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 AFG1LQ8WV93 481 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 EMID1Q96A84 441 aaPredicted RBP19.52■□□□□ 0.72
ACTN4-202ENST00000390009 PTPN18Q99952 460 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.52■□□□□ 0.722e-10■■■■□ 25.5
ACTN4-202ENST00000390009 INO80BQ9C086 356 aaPredicted RBP19.52■□□□□ 0.72
ACTN4-202ENST00000390009 FZD8Q9H461 694 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 NOC2LQ9Y3T9 749 aaKnown RBP19.52■□□□□ 0.72
ACTN4-202ENST00000390009 DDX3YO15523 660 aaKnown RBP19.52■□□□□ 0.72
ACTN4-202ENST00000390009 ASAP2O43150 1006 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 ATMINO43313 823 aaPredicted RBP19.52■□□□□ 0.72
ACTN4-202ENST00000390009 PHACTR2O75167 634 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 CALCAP01258 141 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 PTENP60484 403 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 GRM1Q13255 1194 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 C11orf63Q6NUN7 778 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 TSHZ1Q6ZSZ6 1077 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 WDR49Q8IV35 697 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 KRT12Q99456 494 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 PCDHB2Q9Y5E7 798 aa19.52■□□□□ 0.72
ACTN4-202ENST00000390009 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.51■□□□□ 0.71
ACTN4-202ENST00000390009 PROZP22891 400 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 AP3M2P53677 418 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 TNNC1P63316 161 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 NOP14P78316 857 aaKnown RBP19.51■□□□□ 0.71
ACTN4-202ENST00000390009 NCOA4Q13772 614 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 FAM110CQ1W6H9 321 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 MPZL3Q6UWV2 235 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 MSL3Q8N5Y2 521 aaKnown RBP19.51■□□□□ 0.71
ACTN4-202ENST00000390009 RRAGCQ9HB90 399 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 PTPRHQ9HD43 1115 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 CHORDC1Q9UHD1 332 aaPredicted RBP19.51■□□□□ 0.71
ACTN4-202ENST00000390009 CPSF3Q9UKF6 684 aaKnown RBP19.51■□□□□ 0.71
ACTN4-202ENST00000390009 ALG6Q9Y672 507 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 KAT6AQ92794 2004 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 B4GALT5O43286 388 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 MTA2O94776 668 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 CLTAP09496 248 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 ZNF286BP0CG31 522 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 ACO1P21399 889 aaKnown RBP19.51■□□□□ 0.71
ACTN4-202ENST00000390009 BPIFB4P59827 614 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 MBTD1Q05BQ5 628 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 CLEC16AQ2KHT3 1053 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 ATF7IP2Q5U623 682 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 ACAD10Q6JQN1 1059 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 ZNF653Q96CK0 615 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 MAML3Q96JK9 1138 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 MINDY3Q9H8M7 445 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 GTF3C4Q9UKN8 822 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 NUB1Q9Y5A7 615 aa19.51■□□□□ 0.71
ACTN4-202ENST00000390009 CLSTN1O94985 981 aa19.5■□□□□ 0.71
ACTN4-202ENST00000390009 CYP1A2P05177 515 aa19.5■□□□□ 0.71
ACTN4-202ENST00000390009 TBXAS1P24557 533 aaPredicted RBP19.5■□□□□ 0.71
ACTN4-202ENST00000390009 TNNT3P45378 269 aaPredicted RBP19.5■□□□□ 0.71
ACTN4-202ENST00000390009 ZNF568Q3ZCX4 644 aa19.5■□□□□ 0.71
ACTN4-202ENST00000390009 ZNF677Q86XU0 584 aa19.5■□□□□ 0.71
ACTN4-202ENST00000390009 FAM212AQ96EL1 285 aa19.5■□□□□ 0.71
ACTN4-202ENST00000390009 TMEM132AQ24JP5 1023 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 DCAF12L1Q5VU92 463 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 SCARA3Q6AZY7 606 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 PLEKHH3Q7Z736 793 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 AENQ8WTP8 325 aaKnown RBP19.49■□□□□ 0.71
ACTN4-202ENST00000390009 C16orf70Q9BSU1 422 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 NUP85Q9BW27 656 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 NFKBIZQ9BYH8 718 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 IMPG2Q9BZV3 1241 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 MTMR12Q9C0I1 747 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 UMODL1Q5DID0 1318 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 MAGEB2O15479 319 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 PPFIA4O75335 1185 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 GLI1P08151 1106 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 UNGP13051 313 aaPredicted RBP19.49■□□□□ 0.71
ACTN4-202ENST00000390009 TNFRSF8P28908 595 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 SURF1Q15526 300 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 KLHL7Q8IXQ5 586 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 THNSL1Q8IYQ7 743 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 ZNF564Q8TBZ8 553 aaPredicted RBP19.49■□□□□ 0.71
ACTN4-202ENST00000390009 GDAP1L1Q96MZ0 367 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 AP1M1Q9BXS5 423 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 CARD9Q9H257 536 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 IFT122Q9HBG6 1241 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 PCDHB4Q9Y5E5 795 aa19.49■□□□□ 0.71
ACTN4-202ENST00000390009 A0A0U1RQG5 324 aaPredicted RBP19.48■□□□□ 0.71
ACTN4-202ENST00000390009 TMEM110-MUSTN1A8MSY1 372 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 HEXIM1O94992 359 aaKnown RBP19.48■□□□□ 0.71
ACTN4-202ENST00000390009 CST3P01034 146 aaPredicted RBP19.48■□□□□ 0.71
ACTN4-202ENST00000390009 IQCF3P0C7M6 154 aa19.48■□□□□ 0.71
ACTN4-202ENST00000390009 OAS2P29728 719 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms