RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 CLP1Q92989 425 aaKnown RBP16.78■□□□□ 0.28
PDGFB-202ENST00000381551 CCDC127Q96BQ5 260 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 GZF1Q9H116 711 aaPredicted RBP16.78■□□□□ 0.28
PDGFB-202ENST00000381551 DERAQ9Y315 318 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 C2CD2Q9Y426 696 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 LAMA3Q16787 3333 aa16.78■□□□□ 0.28
PDGFB-202ENST00000381551 ALDH2P05091 517 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 NFICP08651 508 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 CLDN10P78369 228 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 TAP1Q03518 808 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 SOX4Q06945 474 aaPredicted RBP16.77■□□□□ 0.28
PDGFB-202ENST00000381551 TUSC3Q13454 348 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 SPATA1Q5VX52 437 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 INTS8Q75QN2 995 aaKnown RBP16.77■□□□□ 0.28
PDGFB-202ENST00000381551 NT5DC4Q86YG4 428 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 EFCAB13Q8IY85 973 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 FAM186BQ8IYM0 893 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 C18orf25Q96B23 403 aaPredicted RBP16.77■□□□□ 0.28
PDGFB-202ENST00000381551 KIF12Q96FN5 646 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 FAM193BQ96PV7 902 aaPredicted RBP16.77■□□□□ 0.28
PDGFB-202ENST00000381551 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
PDGFB-202ENST00000381551 NAT10Q9H0A0 1025 aaKnown RBP16.77■□□□□ 0.28
PDGFB-202ENST00000381551 NKX2-4Q9H2Z4 354 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 DNAJB4Q9UDY4 337 aa16.77■□□□□ 0.28
PDGFB-202ENST00000381551 TRIOBPQ9H2D6 2365 aa16.77■□□□□ 0.27
PDGFB-202ENST00000381551 GBF1Q92538 1859 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 TULP1O00294 542 aaPredicted RBP16.76■□□□□ 0.27
PDGFB-202ENST00000381551 SLC16A3O15427 465 aaKnown RBP16.76■□□□□ 0.27
PDGFB-202ENST00000381551 FGFR1OPO95684 399 aaKnown RBP16.76■□□□□ 0.27
PDGFB-202ENST00000381551 GALTP07902 379 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 EPB41P11171 864 aaKnown RBP16.76■□□□□ 0.27
PDGFB-202ENST00000381551 CYP3A5P20815 502 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 DNAJB2P25686 324 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 DLG4P78352 724 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 ENPEPQ07075 957 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 TMEM132DQ14C87 1099 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 FRMD5Q7Z6J6 570 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 IRF2BP1Q8IU81 584 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 TMC2Q8TDI7 906 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 FNBP1Q96RU3 617 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 TMEM175Q9BSA9 504 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 UBQLN1Q9UMX0 589 aaKnown RBP16.76■□□□□ 0.27
PDGFB-202ENST00000381551 ANK1P16157 1881 aa16.76■□□□□ 0.27
PDGFB-202ENST00000381551 IKBKBO14920 756 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 GNA14O95837 355 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 DLATP10515 647 aaKnown RBP16.75■□□□□ 0.27
PDGFB-202ENST00000381551 BMPR1AP36894 532 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 ALDH7A1P49419 539 aaKnown RBP16.75■□□□□ 0.27
PDGFB-202ENST00000381551 VAMP7P51809 220 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 BCAR1P56945 870 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 TFAMQ00059 246 aaKnown RBP16.75■□□□□ 0.27
PDGFB-202ENST00000381551 C1orf220Q5T0J3 134 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 SPOUT1Q5T280 376 aaKnown RBP16.75■□□□□ 0.27
PDGFB-202ENST00000381551 KCNT2Q6UVM3 1135 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 WDR49Q8IV35 697 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
PDGFB-202ENST00000381551 ZNF516Q92618 1163 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 TIFAQ96CG3 184 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 PAAF1Q9BRP4 392 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 SLC28A3Q9HAS3 691 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 METTL14Q9HCE5 456 aaKnown RBP16.75■□□□□ 0.27
PDGFB-202ENST00000381551 AAASQ9NRG9 546 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 TUBGCP4Q9UGJ1 667 aa16.75■□□□□ 0.27
PDGFB-202ENST00000381551 ARMCX3Q9UH62 379 aaPredicted RBP16.75■□□□□ 0.27
PDGFB-202ENST00000381551 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.75■□□□□ 0.27
PDGFB-202ENST00000381551 TDRD15B5MCY1 1934 aaKnown RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 PTPRJQ12913 1337 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 CASTOR2A6NHX0 329 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 LRRIQ3A6PVS8 624 aaPredicted RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 SOX1O00570 391 aaPredicted RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 NRP1O14786 923 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 XPOTO43592 962 aaKnown RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 ZC3H11AO75152 810 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 KRT13P13646 458 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 LAG3P18627 525 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 TNNI1P19237 187 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 RPL9P32969 192 aaKnown RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 SLC11A1P49279 550 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 ZNF165P49910 485 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 CLCNKBP51801 687 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 MARSP56192 900 aaKnown RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 ERVK-21P61565 698 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 BFSP1Q12934 665 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 NCAPHQ15003 741 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 UPP1Q16831 310 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 TPD52L1Q16890 204 aaPredicted RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 LMBRD2Q68DH5 695 aaPredicted RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 SPRED2Q7Z698 418 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 TMEM130Q8N3G9 435 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 COLGALT1Q8NBJ5 622 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 BEST2Q8NFU1 509 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 OR5B17Q8NGF7 314 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 RABGGTAQ92696 567 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 DDX27Q96GQ7 796 aaKnown RBP16.74■□□□□ 0.27
PDGFB-202ENST00000381551 FAM84AQ96KN4 292 aa16.74■□□□□ 0.27
PDGFB-202ENST00000381551 TGS1Q96RS0 853 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms