RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 CLIC2O15247 247 aa21.09■□□□□ 0.97
GTF3A-201ENST00000381140 RHOBTB3O94955 611 aa21.09■□□□□ 0.97
GTF3A-201ENST00000381140 SMC2O95347 1197 aa21.09■□□□□ 0.97
GTF3A-201ENST00000381140 KCNE1P15382 129 aa21.09■□□□□ 0.97
GTF3A-201ENST00000381140 GARTP22102 1010 aa21.09■□□□□ 0.97
GTF3A-201ENST00000381140 SOX4Q06945 474 aaPredicted RBP21.09■□□□□ 0.97
GTF3A-201ENST00000381140 HSP90AA2PQ14568 343 aaPredicted RBP21.09■□□□□ 0.97
GTF3A-201ENST00000381140 TCEAL5Q5H9L2 206 aa21.09■□□□□ 0.97
GTF3A-201ENST00000381140 HS2ST1Q7LGA3 356 aa21.09■□□□□ 0.97
GTF3A-201ENST00000381140 SLC38A7Q9NVC3 462 aa21.09■□□□□ 0.97
GTF3A-201ENST00000381140 MAPK8IP1Q9UQF2 711 aa21.09■□□□□ 0.97
GTF3A-201ENST00000381140 TTC26A0AVF1 554 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 TADA2AO75478 443 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 CYP2J2P51589 502 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 KNOP1Q1ED39 458 aaKnown RBP21.08■□□□□ 0.96
GTF3A-201ENST00000381140 ADGRD2Q7Z7M1 963 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 DDX53Q86TM3 631 aaKnown RBP21.08■□□□□ 0.96
GTF3A-201ENST00000381140 RBM23Q86U06 439 aaKnown RBP21.08■□□□□ 0.96
GTF3A-201ENST00000381140 TMEM130Q8N3G9 435 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 AUTS2Q8WXX7 1259 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 SMARCE1Q969G3 411 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 VN1R3Q9BXE9 311 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 IGFLR1Q9H665 355 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 PLEKHA5Q9HAU0 1116 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 AGPAT3Q9NRZ7 376 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 TUBGCP4Q9UGJ1 667 aa21.08■□□□□ 0.96
GTF3A-201ENST00000381140 TGFB1I1O43294 461 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 KIF4AO95239 1232 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 CLCNKBP51801 687 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 KCNB1Q14721 858 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 BMT2Q1RMZ1 405 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 JADE1Q6IE81 842 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 CRELD2Q6UXH1 353 aaPredicted RBP21.07■□□□□ 0.96
GTF3A-201ENST00000381140 EP400NLQ6ZTU2 488 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 RMND1Q9NWS8 449 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 HSPBP1Q9NZL4 362 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 PCDHA5Q9Y5H7 936 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 REV3LO60673 3130 aa21.07■□□□□ 0.96
GTF3A-201ENST00000381140 BRWD1Q9NSI6 2320 aa21.06■□□□□ 0.96
GTF3A-201ENST00000381140 VWA8A3KMH1 1905 aa21.06■□□□□ 0.96
GTF3A-201ENST00000381140 EXTL3O43909 919 aa21.06■□□□□ 0.96
GTF3A-201ENST00000381140 LDHAP00338 332 aaKnown RBP21.06■□□□□ 0.96
GTF3A-201ENST00000381140 SMYD4Q8IYR2 804 aaPredicted RBP21.06■□□□□ 0.96
GTF3A-201ENST00000381140 GPD1LQ8N335 351 aa21.06■□□□□ 0.96
GTF3A-201ENST00000381140 ANP32EQ9BTT0 268 aa21.06■□□□□ 0.96
GTF3A-201ENST00000381140 PRDM6Q9NQX0 595 aa21.06■□□□□ 0.96
GTF3A-201ENST00000381140 RBAKQ9NYW8 714 aaPredicted RBP21.06■□□□□ 0.96
GTF3A-201ENST00000381140 ADAM28Q9UKQ2 775 aa21.06■□□□□ 0.96
GTF3A-201ENST00000381140 COL6A3P12111 3177 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 C2CD2LO14523 706 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 FSCN2O14926 492 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 B3GAT3O94766 335 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 CXCL14O95715 111 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 NFICP08651 508 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 GTF2F1P35269 517 aaKnown RBP eCLIP21.05■□□□□ 0.96
GTF3A-201ENST00000381140 GUCY2FP51841 1108 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 SMC1AQ14683 1233 aaKnown RBP21.05■□□□□ 0.96
GTF3A-201ENST00000381140 BMS1Q14692 1282 aaKnown RBP21.05■□□□□ 0.96
GTF3A-201ENST00000381140 TMEM132DQ14C87 1099 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 ISM2Q6H9L7 571 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 FUT10Q6P4F1 479 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 TAS1R1Q7RTX1 841 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 CD302Q8IX05 232 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 PPP2R3CQ969Q6 453 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 SYAP1Q96A49 352 aaPredicted RBP21.05■□□□□ 0.96
GTF3A-201ENST00000381140 B3GALT6Q96L58 329 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 UROC1Q96N76 676 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 ZBP1Q9H171 429 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 TLE6Q9H808 572 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 EYSQ5T1H1 3165 aa21.05■□□□□ 0.96
GTF3A-201ENST00000381140 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.04■□□□□ 0.96
GTF3A-201ENST00000381140 HIDE1A8MVS5 230 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 PODXLO00592 558 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 PER2O15055 1255 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 KIF20AO95235 890 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 IGFBP6P24592 240 aaPredicted RBP21.04■□□□□ 0.96
GTF3A-201ENST00000381140 NRIP1P48552 1158 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 CAMK4Q16566 473 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 PDE12Q6L8Q7 609 aaKnown RBP21.04■□□□□ 0.96
GTF3A-201ENST00000381140 CAVIN1Q6NZI2 390 aaKnown RBP21.04■□□□□ 0.96
GTF3A-201ENST00000381140 BRSK2Q8IWQ3 736 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 RDH13Q8NBN7 331 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 DDX27Q96GQ7 796 aaKnown RBP21.04■□□□□ 0.96
GTF3A-201ENST00000381140 GSDMAQ96QA5 445 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 HERC2P3Q9BVR0 1158 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 GPR62Q9BZJ7 368 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 NGRNQ9NPE2 291 aaKnown RBP21.04■□□□□ 0.96
GTF3A-201ENST00000381140 UBQLN1Q9UMX0 589 aaKnown RBP21.04■□□□□ 0.96
GTF3A-201ENST00000381140 SCN1AP35498 2009 aa21.04■□□□□ 0.96
GTF3A-201ENST00000381140 SF3B1O75533 1304 aaKnown RBP eCLIP21.03■□□□□ 0.961e-6■■■■■ 64.6
GTF3A-201ENST00000381140 KIAA0391O15091 583 aaKnown RBP21.03■□□□□ 0.96
GTF3A-201ENST00000381140 XPOTO43592 962 aaKnown RBP21.03■□□□□ 0.96
GTF3A-201ENST00000381140 IL18RAPO95256 599 aa21.03■□□□□ 0.96
GTF3A-201ENST00000381140 URODP06132 367 aa21.03■□□□□ 0.96
GTF3A-201ENST00000381140 CTSAP10619 480 aa21.03■□□□□ 0.96
GTF3A-201ENST00000381140 SNRPFP62306 86 aaKnown RBP21.03■□□□□ 0.96
GTF3A-201ENST00000381140 HYAL1Q12794 435 aa21.03■□□□□ 0.96
GTF3A-201ENST00000381140 UPP1Q16831 310 aa21.03■□□□□ 0.96
GTF3A-201ENST00000381140 KIAA1841Q6NSI8 718 aa21.03■□□□□ 0.96
GTF3A-201ENST00000381140 DCLRE1AQ6PJP8 1040 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms