RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 KRT17Q04695 432 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 HSP90AA2PQ14568 343 aaPredicted RBP16.12■□□□□ 0.17
VCX3B-201ENST00000381029 UPP1Q16831 310 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 PDE12Q6L8Q7 609 aaKnown RBP16.12■□□□□ 0.17
VCX3B-201ENST00000381029 STXBP4Q6ZWJ1 553 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 C12orf56Q8IXR9 622 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 TMEM174Q8WUU8 243 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 GPR62Q9BZJ7 368 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 KCTD10Q9H3F6 313 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 AGPAT3Q9NRZ7 376 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 CHST7Q9NS84 486 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
VCX3B-201ENST00000381029 GTF2F1P35269 517 aaKnown RBP eCLIP16.11■□□□□ 0.17
VCX3B-201ENST00000381029 UBE2HP62256 183 aa16.11■□□□□ 0.17
VCX3B-201ENST00000381029 KNOP1Q1ED39 458 aaKnown RBP16.11■□□□□ 0.17
VCX3B-201ENST00000381029 VPS52Q8N1B4 723 aa16.11■□□□□ 0.17
VCX3B-201ENST00000381029 MICALL1Q8N3F8 863 aa16.11■□□□□ 0.17
VCX3B-201ENST00000381029 MRPL43Q8N983 215 aaKnown RBP16.11■□□□□ 0.17
VCX3B-201ENST00000381029 TCF25Q9BQ70 676 aa16.11■□□□□ 0.17
VCX3B-201ENST00000381029 NGRNQ9NPE2 291 aaKnown RBP16.11■□□□□ 0.17
VCX3B-201ENST00000381029 TUBGCP4Q9UGJ1 667 aa16.11■□□□□ 0.17
VCX3B-201ENST00000381029 ADAM28Q9UKQ2 775 aa16.11■□□□□ 0.17
VCX3B-201ENST00000381029 ANK1P16157 1881 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 C2orf71A6NGG8 1288 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 SOD2P04179 222 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 CYP3A5P20815 502 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 LRPAP1P30533 357 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 LTBRP36941 435 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 MATR3P43243 847 aaKnown RBP eCLIP16.1■□□□□ 0.17
VCX3B-201ENST00000381029 CLCNKBP51801 687 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 SNRPFP62306 86 aaKnown RBP16.1■□□□□ 0.17
VCX3B-201ENST00000381029 SPAG1Q07617 926 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 KIAA0319Q5VV43 1072 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 BRSK2Q8IWQ3 736 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 NELFCDQ8IXH7 590 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 SYCP3Q8IZU3 236 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 VN1R2Q8NFZ6 395 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 PPM1EQ8WY54 764 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 ERCC4Q92889 916 aaPredicted RBP16.1■□□□□ 0.17
VCX3B-201ENST00000381029 SAAL1Q96ER3 474 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 UROC1Q96N76 676 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 TSPAN18Q96SJ8 248 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 HERC2P3Q9BVR0 1158 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 COLEC11Q9BWP8 271 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 GZF1Q9H116 711 aaPredicted RBP16.1■□□□□ 0.17
VCX3B-201ENST00000381029 ASB7Q9H672 318 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 RPF1Q9H9Y2 349 aaKnown RBP16.1■□□□□ 0.17
VCX3B-201ENST00000381029 LMBRD1Q9NUN5 540 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 SLC38A7Q9NVC3 462 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 DMAC2Q9NW81 257 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
VCX3B-201ENST00000381029 PCDHA5Q9Y5H7 936 aa16.1■□□□□ 0.17
VCX3B-201ENST00000381029 KIAA0391O15091 583 aaKnown RBP16.09■□□□□ 0.17
VCX3B-201ENST00000381029 EXTL3O43909 919 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 PRPF40AO75400 957 aaKnown RBP16.09■□□□□ 0.17
VCX3B-201ENST00000381029 GLP2RO95838 553 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 NFICP08651 508 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 PPP2R3AQ06190 1150 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 DUSP6Q16828 381 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 COBLL1Q53SF7 1204 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 SPATA1Q5VX52 437 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 PLPP4Q5VZY2 271 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 JADE1Q6IE81 842 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 ARMCX5Q6P1M9 558 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 FUT10Q6P4F1 479 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 DCLRE1AQ6PJP8 1040 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 CD302Q8IX05 232 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 EFCAB13Q8IY85 973 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 GPR65Q8IYL9 337 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 CXorf38Q8TB03 319 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 AUTS2Q8WXX7 1259 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 GSDMAQ96QA5 445 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 PCIF1Q9H4Z3 704 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 HSPBP1Q9NZL4 362 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 DERAQ9Y315 318 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 C2CD2Q9Y426 696 aa16.09■□□□□ 0.17
VCX3B-201ENST00000381029 ANO9A1A5B4 782 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 GOLGA8IPA6NC78 632 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 GOLGA8JA6NMD2 632 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 LINC01565O15544 149 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 CSPG5O95196 566 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 LDHAP00338 332 aaKnown RBP16.08■□□□□ 0.16
VCX3B-201ENST00000381029 RPL9P32969 192 aaKnown RBP16.08■□□□□ 0.16
VCX3B-201ENST00000381029 DSG1Q02413 1049 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 ADAM15Q13444 863 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 SMC1AQ14683 1233 aaKnown RBP16.08■□□□□ 0.16
VCX3B-201ENST00000381029 ZCWPW2Q504Y3 356 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 SCARA3Q6AZY7 606 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 TMC7Q7Z402 723 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 SLC9A9Q8IVB4 645 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 GPD1LQ8N335 351 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 GUF1Q8N442 669 aaKnown RBP16.08■□□□□ 0.16
VCX3B-201ENST00000381029 PABPC5Q96DU9 382 aaKnown RBP16.08■□□□□ 0.16
VCX3B-201ENST00000381029 DDX27Q96GQ7 796 aaKnown RBP16.08■□□□□ 0.16
VCX3B-201ENST00000381029 FAM213AQ9BRX8 229 aa16.08■□□□□ 0.16
VCX3B-201ENST00000381029 CGNQ9P2M7 1197 aaKnown RBP16.08■□□□□ 0.16
VCX3B-201ENST00000381029 STK39Q9UEW8 545 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms