RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 KYAT1Q16773 422 aa23.1■■□□□ 1.29
GMDS-202ENST00000380815 DNAAF5Q86Y56 855 aa23.1■■□□□ 1.29
GMDS-202ENST00000380815 PALB2Q86YC2 1186 aa23.1■■□□□ 1.29
GMDS-202ENST00000380815 DHX38Q92620 1227 aaKnown RBP23.1■■□□□ 1.29
GMDS-202ENST00000380815 GOLGA1Q92805 767 aa23.1■■□□□ 1.29
GMDS-202ENST00000380815 ELMO3Q96BJ8 720 aa23.1■■□□□ 1.29
GMDS-202ENST00000380815 FAM212AQ96EL1 285 aa23.1■■□□□ 1.29
GMDS-202ENST00000380815 KATNAL1Q9BW62 490 aa23.1■■□□□ 1.29
GMDS-202ENST00000380815 ANKRD62A6NC57 917 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 DUSP11O75319 330 aaKnown RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 MYL3P08590 195 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 CLTAP09496 248 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 GZMAP12544 262 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 CHRNB2P17787 502 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 TBXAS1P24557 533 aaPredicted RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 PDE6CP51160 858 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 NOP14P78316 857 aaKnown RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 IRX5P78411 483 aaPredicted RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 ADAM17P78536 824 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 CUL2Q13617 745 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 FSCN1Q16658 493 aaKnown RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 CEP120Q8N960 986 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 IMPG2Q9BZV3 1241 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 ARHGAP39Q9C0H5 1083 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 MTMR12Q9C0I1 747 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 ISCUQ9H1K1 167 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 ADAMTS10Q9H324 1103 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 RPF1Q9H9Y2 349 aaKnown RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 APOBEC3GQ9HC16 384 aaKnown RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 PUF60Q9UHX1 559 aaKnown RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 CTAGE15A4D2H0 777 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 GRID2IPA4D2P6 1211 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 TMCO5BA8MYB1 307 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 TSPAN1O60635 241 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 SRGAP2O75044 1071 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 ERLIN2O94905 339 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 TFRCP02786 760 aaKnown RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 CTAGE8P0CG41 777 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 BEX3Q00994 111 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 CDR2Q01850 454 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 MFSD14CQ5VZR4 134 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 SPOPLQ6IQ16 392 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 CTAGE6Q86UF2 777 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 CTAGE4Q8IX94 777 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 CTNNBL1Q8WYA6 563 aaPredicted RBP23.09■■□□□ 1.29
GMDS-202ENST00000380815 ARID3AQ99856 593 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 TLR10Q9BXR5 811 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 TAS2R14Q9NYV8 317 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 NCANO14594 1321 aa23.09■■□□□ 1.29
GMDS-202ENST00000380815 A0A1B0GUA9 196 aa23.08■■□□□ 1.29
GMDS-202ENST00000380815 ASS1P00966 412 aaKnown RBP23.08■■□□□ 1.29
GMDS-202ENST00000380815 KRT5P13647 590 aa23.08■■□□□ 1.29
GMDS-202ENST00000380815 TCP1P17987 556 aaKnown RBP23.08■■□□□ 1.29
GMDS-202ENST00000380815 NOP2P46087 812 aaKnown RBP23.08■■□□□ 1.29
GMDS-202ENST00000380815 OSTNP61366 133 aa23.08■■□□□ 1.29
GMDS-202ENST00000380815 TRPV1Q8NER1 839 aa23.08■■□□□ 1.29
GMDS-202ENST00000380815 RABGGTAQ92696 567 aa23.08■■□□□ 1.29
GMDS-202ENST00000380815 CPB2Q96IY4 423 aa23.08■■□□□ 1.29
GMDS-202ENST00000380815 FAM49AQ9H0Q0 323 aaPredicted RBP23.08■■□□□ 1.29
GMDS-202ENST00000380815 ACP6Q9NPH0 428 aa23.08■■□□□ 1.29
GMDS-202ENST00000380815 HYOU1Q9Y4L1 999 aa23.08■■□□□ 1.29
GMDS-202ENST00000380815 GPR32O75388 356 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 TOMM70O94826 608 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 STAG3L1P0CL83 205 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 CYP2C9P11712 490 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 CYBAP13498 195 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 ACO1P21399 889 aaKnown RBP23.07■■□□□ 1.28
GMDS-202ENST00000380815 BPIFB4P59827 614 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 FMO1Q01740 532 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 CKAP4Q07065 602 aaKnown RBP23.07■■□□□ 1.28
GMDS-202ENST00000380815 PCBP1Q15365 356 aaKnown RBP eCLIP23.07■■□□□ 1.282e-6■■■■□ 21.7
GMDS-202ENST00000380815 KIZQ2M2Z5 673 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 REM2Q8IYK8 340 aaPredicted RBP23.07■■□□□ 1.28
GMDS-202ENST00000380815 RFFLQ8WZ73 363 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 DDX1Q92499 740 aaKnown RBP23.07■■□□□ 1.28
GMDS-202ENST00000380815 PCDHB18PQ96TA0 734 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 GCOM2Q9BZD3 368 aaPredicted RBP23.07■■□□□ 1.28
GMDS-202ENST00000380815 NUB1Q9Y5A7 615 aa23.07■■□□□ 1.28
GMDS-202ENST00000380815 RTN2O75298 545 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 TBC1D8O95759 1140 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 CST3P01034 146 aaPredicted RBP23.06■■□□□ 1.28
GMDS-202ENST00000380815 TNNC2P02585 160 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 TMEM191BP0C7N4 346 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 CXCL8P10145 99 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 FLT3LGP49771 235 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 TFAMQ00059 246 aaKnown RBP23.06■■□□□ 1.28
GMDS-202ENST00000380815 PURAQ00577 322 aaKnown RBP23.06■■□□□ 1.28
GMDS-202ENST00000380815 SGSM1Q2NKQ1 1148 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 MEI1Q5TIA1 1274 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 TAF3Q5VWG9 929 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 SMYD5Q6GMV2 418 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 EFCAB13Q8IY85 973 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 TMEM192Q8IY95 271 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 LRRC57Q8N9N7 239 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 TPCN2Q8NHX9 752 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 TRIB2Q92519 343 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 ANKRD36BP1Q96IX9 119 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 OSBPL9Q96SU4 736 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 GABRQQ9UN88 632 aa23.06■■□□□ 1.28
GMDS-202ENST00000380815 CNTN6Q9UQ52 1028 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms