RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 BAIAP2L1Q9UHR4 511 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 SPACA6W5XKT8 324 aa7.57□□□□□ -1.2
CCDC171-201ENST00000380701 SSU72P8A0A1W2PR75 194 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 DNAJC6O75061 913 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 NPEPPSP55786 919 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 USP50Q70EL3 339 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 DDX53Q86TM3 631 aaKnown RBP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 PDCD6IPQ8WUM4 868 aaKnown RBP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 NUP85Q9BW27 656 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 RRN3Q9NYV6 651 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 CPS1P31327 1500 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 MYCP01106 439 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 AXLP30530 894 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 FBXW4P57775 412 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 THEMIS2Q5TEJ8 643 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 UGT3A1Q6NUS8 523 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 LINC00523Q86TU6 105 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 PGBD3Q8N328 593 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 BCAS4Q8TDM0 211 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 DPF2Q92785 391 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 PCDHB12Q9Y5F1 795 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 HNRNPCL2B2RXH8 293 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 RPA1P27694 616 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 CAP2P40123 477 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 CLNS1AP54105 237 aaKnown RBP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 PRKCEQ02156 737 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 WDR72Q3MJ13 1102 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 CYFIP1Q7L576 1253 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 TAS2R42Q7RTR8 314 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 CCNJLQ8IV13 435 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 SLC26A7Q8TE54 656 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 SAYSD1Q9NPB0 183 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 HSPBP1Q9NZL4 362 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 PCDHB2Q9Y5E7 798 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 USP32Q8NFA0 1604 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 CLTCL1P53675 1640 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 ARHGAP10A1A4S6 786 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 IGF2BP3O00425 579 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 FXR2P51116 673 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 C9orf131Q5VYM1 1079 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 PDCD7Q8N8D1 485 aaKnown RBP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 LINC00116Q8NCU8 138 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 GMCL1P1Q8NEA9 526 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 SNF8Q96H20 258 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 GMCL1Q96IK5 515 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 TMEM8AQ9HCN3 771 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 VTA1Q9NP79 307 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 IQSEC2Q5JU85 1478 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 TECPR2O15040 1411 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 POTEFA5A3E0 1075 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 BAG2O95816 211 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 POTEIP0CG38 1075 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 SULT1E1P49888 294 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 ZNF135P52742 658 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 PTK6Q13882 451 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 STAT4Q14765 748 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 PCBP1Q15365 356 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC171-201ENST00000380701 KIF19Q2TAC6 998 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 POTEGQ6S5H5 508 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 POTEEQ6S8J3 1075 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 CYB5R4Q7L1T6 521 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 RRM2BQ7LG56 351 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 NT5DC4Q86YG4 428 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 TRAIPQ9BWF2 469 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 ECT2Q9H8V3 914 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 RSAD1Q9HA92 442 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 NDFIP2Q9NV92 336 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 SMARCAL1Q9NZC9 954 aa7.56□□□□□ -1.2
CCDC171-201ENST00000380701 EMSYQ7Z589 1322 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 HGSO14964 777 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 SUPT3HO75486 399 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 FTCDO95954 541 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 NCOA4Q13772 614 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 BOLA3Q53S33 107 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 SLC44A5Q8NCS7 719 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 AGPAT1Q99943 283 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 SAMSN1Q9NSI8 373 aaKnown RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 THG1LQ9NWX6 298 aaKnown RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 SNX9Q9Y5X1 595 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ESRRAP11474 423 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 CYP11B2P19099 503 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 CDH6P55285 790 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 DCAF6Q58WW2 860 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ARL8AQ96BM9 186 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 MCCC1Q96RQ3 725 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 SENP7Q9BQF6 1050 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 PRDM16Q9HAZ2 1276 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 TARSL2A2RTX5 802 aaKnown RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 SPECC1L-ADORA2AF8WAN1 911 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 CCDC22O60826 627 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ANXA9O76027 345 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 FAM200BP0CF97 657 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ATICP31939 592 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 BACE1P56817 501 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 TMPRSS15P98073 1019 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 TOB2Q14106 344 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ZNF280DQ6N043 979 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 ATG9AQ7Z3C6 839 aa7.55□□□□□ -1.2
CCDC171-201ENST00000380701 DCLK2Q8N568 766 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms