RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 LBRQ14739 615 aaKnown RBP16.91■□□□□ 0.3
COL2A1-202ENST00000380518 P3H1Q32P28 736 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 C16orf86Q6ZW13 317 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 ICA1LQ8NDH6 482 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 PGBD4Q96DM1 585 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 ATXN8OSP0DMR3 200 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 FDPSP14324 419 aaKnown RBP16.91■□□□□ 0.3
COL2A1-202ENST00000380518 SGSM1Q2NKQ1 1148 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 SGSM3Q96HU1 749 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 TPI1P60174 286 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 PIGHQ14442 188 aaPredicted RBP16.91■□□□□ 0.3
COL2A1-202ENST00000380518 RABGAP1LQ5R372 815 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 SZRD1Q7Z422 152 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 RBBP8NLQ8NC74 664 aaPredicted RBP16.91■□□□□ 0.3
COL2A1-202ENST00000380518 MTBPQ96DY7 904 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 KLC4Q9NSK0 619 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 PITPNM2Q9BZ72 1349 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 PDHBP11177 359 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 RASA1P20936 1047 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 CDC42EP1Q00587 391 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 SH2D3CQ8N5H7 860 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 CPA5Q8WXQ8 436 aa16.91■□□□□ 0.3
COL2A1-202ENST00000380518 EPB41L4AQ9HCS5 686 aaPredicted RBP16.91■□□□□ 0.3
COL2A1-202ENST00000380518 APRTP07741 180 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 MTMR2Q13614 643 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 RARS2Q5T160 578 aaKnown RBP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 ASAP3Q8TDY4 903 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 SH2D3AQ9BRG2 576 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 GYPCP04921 128 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 TMEM253P0C7T8 217 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 PGM1P36871 562 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 KCNA1Q09470 495 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 ELOA2Q8IYF1 753 aaPredicted RBP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 CCT8L2Q96SF2 557 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 PLEKHA5Q9HAU0 1116 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 RBM12Q9NTZ6 932 aaKnown RBP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 PRR12Q9ULL5 1215 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 PCDHB2Q9Y5E7 798 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 MYBP10242 640 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 HIC1Q14526 733 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 TBCCQ15814 346 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 HHIPL2Q6UWX4 724 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 TRAPPC11Q7Z392 1133 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 SEPT1Q8WYJ6 367 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 TMEM143Q96AN5 459 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 PRMT1Q99873 361 aaKnown RBP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 EML4Q9HC35 981 aaKnown RBP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 KLHL11Q9NVR0 708 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 PXDNLA1KZ92 1463 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 C3orf70A6NLC5 250 aaPredicted RBP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 EIF3DO15371 548 aaKnown RBP eCLIP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 NR3C2P08235 984 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 RALAP11233 206 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 SLC9A1P19634 815 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 CUL3Q13618 768 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 SMAD1Q15797 465 aaKnown RBP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 DDIASQ8IXT1 998 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 C9orf72Q96LT7 481 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 TMEM117Q9H0C3 514 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 ALG13Q9NP73 1137 aaKnown RBP16.9■□□□□ 0.3
COL2A1-202ENST00000380518 RAB6BQ9NRW1 208 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 MOSPD1Q9UJG1 213 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 SNX9Q9Y5X1 595 aa16.9■□□□□ 0.3
COL2A1-202ENST00000380518 CNTNAP5Q8WYK1 1306 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 ARHGAP10A1A4S6 786 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 RPA1P27694 616 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 TKFCQ3LXA3 575 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 RMDN1Q96DB5 314 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 RIT2Q99578 217 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 FAM167BQ9BTA0 163 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 TEX12Q9BXU0 123 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 AIPL1Q9NZN9 384 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 TRIM10Q9UDY6 481 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 ZC3H7BQ9UGR2 993 aaKnown RBP16.89■□□□□ 0.29
COL2A1-202ENST00000380518 REREQ9P2R6 1566 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 DFFAO00273 331 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 EIF3HO15372 352 aaKnown RBP eCLIP16.89■□□□□ 0.291e-6■■■□□ 18.2
COL2A1-202ENST00000380518 MYO1DO94832 1006 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 CPB1P15086 417 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 KCNA2P16389 499 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 UGP2Q16851 508 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 MARCH10Q8NA82 808 aaPredicted RBP16.89■□□□□ 0.29
COL2A1-202ENST00000380518 ARHGEF26Q96DR7 871 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 NEU2Q9Y3R4 380 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 GOLGA8RI6L899 631 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 CHN1P15882 459 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 AGBL2Q5U5Z8 902 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 TAS2R42Q7RTR8 314 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 ZNF473Q8WTR7 871 aaKnown RBP16.89■□□□□ 0.29
COL2A1-202ENST00000380518 RANBP17Q9H2T7 1088 aaKnown RBP16.89■□□□□ 0.29
COL2A1-202ENST00000380518 NDFIP2Q9NV92 336 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 PSMC3IPQ9P2W1 217 aaPredicted RBP16.89■□□□□ 0.29
COL2A1-202ENST00000380518 ZNRF3Q9ULT6 936 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 FARP1Q9Y4F1 1045 aaPredicted RBP16.89■□□□□ 0.29
COL2A1-202ENST00000380518 P4HA2O15460 535 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL2A1-202ENST00000380518 SNRPFP62306 86 aaKnown RBP16.89■□□□□ 0.29
COL2A1-202ENST00000380518 JAMLQ86YT9 394 aa16.89■□□□□ 0.29
COL2A1-202ENST00000380518 CLEC10AQ8IUN9 316 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms