RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 SLC39A10Q9ULF5 831 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 APRTP07741 180 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 TXNP10599 105 aaKnown RBP13.08□□□□□ -0.32
CHD3-203ENST00000380358 FOSL2P15408 326 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 SERPINB3P29508 390 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 CHI3L1P36222 383 aaPredicted RBP13.08□□□□□ -0.32
CHD3-203ENST00000380358 ACOT2P49753 483 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 CPA5Q8WXQ8 436 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 PAGE5Q96GU1 130 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 MRPL4Q9BYD3 311 aaKnown RBP13.08□□□□□ -0.32
CHD3-203ENST00000380358 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 PGK2P07205 417 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 PCNAP12004 261 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 ETF1P62495 437 aaKnown RBP13.08□□□□□ -0.32
CHD3-203ENST00000380358 AP2B1P63010 937 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 C10orf120Q5SQS8 335 aa13.08□□□□□ -0.32
CHD3-203ENST00000380358 DDX50Q9BQ39 737 aaKnown RBP13.08□□□□□ -0.32
CHD3-203ENST00000380358 KLK14Q9P0G3 267 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 IPO5O00410 1097 aaKnown RBP13.07□□□□□ -0.32
CHD3-203ENST00000380358 ZBTB39O15060 712 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 VAMP7P51809 220 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 ATPAF2Q8N5M1 289 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 SPATA18Q8TC71 538 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 MTIF3Q9H2K0 278 aaKnown RBP13.07□□□□□ -0.32
CHD3-203ENST00000380358 MFSD1Q9H3U5 465 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 STMN3Q9NZ72 180 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 PCDHB8Q9UN66 801 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 FTLP02792 175 aaPredicted RBP13.07□□□□□ -0.32
CHD3-203ENST00000380358 AKAP5P24588 427 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 ARSEP51690 589 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 EIF3EP60228 445 aaKnown RBP13.07□□□□□ -0.32
CHD3-203ENST00000380358 CENPPQ6IPU0 288 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 ARHGEF25Q86VW2 580 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 THTPAQ9BU02 230 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 AGAP1Q9UPQ3 857 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 ASNSP08243 561 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 GPC1P35052 558 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 IL13P35225 146 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 TRIM71Q2Q1W2 868 aaKnown RBP13.07□□□□□ -0.32
CHD3-203ENST00000380358 AHI1Q8N157 1196 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 ARHGEF38Q9NXL2 777 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 TBC1D4O60343 1298 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 PLOD1Q02809 727 aaPredicted RBP13.07□□□□□ -0.32
CHD3-203ENST00000380358 BRIP1Q9BX63 1249 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 ZNF304Q9HCX3 659 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 C20orf96Q9NUD7 363 aaPredicted RBP13.07□□□□□ -0.32
CHD3-203ENST00000380358 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
CHD3-203ENST00000380358 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
CHD3-203ENST00000380358 F8W810 466 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 TOMM70O94826 608 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 TRIM49P0CI25 452 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 TRIM49CP0CI26 452 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 ITGAXP20702 1163 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 YY1P25490 414 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 POU1F1P28069 291 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 CCDC15Q0P6D6 951 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 PGS1Q32NB8 556 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 OSBPL1AQ9BXW6 950 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 PTPRHQ9HD43 1115 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 FAM47E-STBD1D6RA91 191 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 HSD17B4P51659 736 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 RBM6P78332 1123 aaKnown RBP13.06□□□□□ -0.32
CHD3-203ENST00000380358 ADCY2Q08462 1091 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 TP53BP2Q13625 1128 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 R3HDM1Q15032 1099 aaKnown RBP13.06□□□□□ -0.32
CHD3-203ENST00000380358 SLC7A14Q8TBB6 771 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 UBA3Q8TBC4 463 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 EXOC4Q96A65 974 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 TMEM60Q9H2L4 133 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 KRT84Q9NSB2 600 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 A0A0G2JLW4 131 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 PCCAP05165 728 aaPredicted RBP13.06□□□□□ -0.32
CHD3-203ENST00000380358 CHRNA5P30532 468 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 IRAK1BP1Q5VVH5 260 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 OTOAQ7RTW8 1153 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 DEFB128Q7Z7B8 93 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 PTPRN2Q92932 1015 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 NACC2Q96BF6 587 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 TASP1Q9H6P5 420 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 AIM2O14862 343 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 HAUS5O94927 633 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 JAK3P52333 1124 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 ARFIP2P53365 341 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 MTMR2Q13614 643 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 GPT2Q8TD30 523 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 PMM1Q92871 262 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 FAM129AQ9BZQ8 928 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 LSG1Q9H089 658 aaKnown RBP13.06□□□□□ -0.32
CHD3-203ENST00000380358 KLHL25Q9H0H3 589 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 DHX36Q9H2U1 1008 aaKnown RBP13.06□□□□□ -0.32
CHD3-203ENST00000380358 RPS6KB2Q9UBS0 482 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 S100A5P33763 92 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 GPC5P78333 572 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 USP10Q14694 798 aaKnown RBP13.06□□□□□ -0.32
CHD3-203ENST00000380358 CDR2LQ86X02 465 aaPredicted RBP13.06□□□□□ -0.32
CHD3-203ENST00000380358 SH3TC2Q8TF17 1288 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 ABCB6Q9NP58 842 aa13.06□□□□□ -0.32
CHD3-203ENST00000380358 FBXO10Q9UK96 956 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms