RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
CKAP2-202ENST00000378034 ALG13Q9NP73 1137 aaKnown RBP14.39□□□□□ -0.11
CKAP2-202ENST00000378034 UBQLN1Q9UMX0 589 aaKnown RBP14.39□□□□□ -0.11
CKAP2-202ENST00000378034 NT5C1B-RDH14C9J2C7 533 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 CLIC2O15247 247 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 FOSL2P15408 326 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 RPL9P32969 192 aaKnown RBP14.38□□□□□ -0.11
CKAP2-202ENST00000378034 PBX3P40426 434 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 STIM1Q13586 685 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 MORC3Q14149 939 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 ADGRE1Q14246 886 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 SURF1Q15526 300 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 ZBTB6Q15916 424 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 CAMK4Q16566 473 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 DDX53Q86TM3 631 aaKnown RBP14.38□□□□□ -0.11
CKAP2-202ENST00000378034 POF1BQ8WVV4 589 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 KIF12Q96FN5 646 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 NUP62CLQ9H1M0 184 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 DMAC2Q9NW81 257 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 RBAKQ9NYW8 714 aaPredicted RBP14.38□□□□□ -0.11
CKAP2-202ENST00000378034 C2CD2Q9Y426 696 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 MTCH2Q9Y6C9 303 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 ANK1P16157 1881 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 CHD7Q9P2D1 2997 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 MCM4P33991 863 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 PRCPP42785 496 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 BMS1Q14692 1282 aaKnown RBP14.38□□□□□ -0.11
CKAP2-202ENST00000378034 DCLRE1AQ6PJP8 1040 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 ADSSL1Q8N142 457 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 GPT2Q8TD30 523 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 FAM212AQ96EL1 285 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 MAPK8IP1Q9UQF2 711 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 STXBP5LQ9Y2K9 1186 aa14.38□□□□□ -0.11
CKAP2-202ENST00000378034 MYO9BQ13459 2157 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 TRANK1O15050 2925 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 GOLGA8IPA6NC78 632 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 CASTOR2A6NHX0 329 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 GOLGA8JA6NMD2 632 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 TMEM189-UBE2V1I3L0A0 370 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 NR3C1P04150 777 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 PTMSP20962 102 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 IGFBP4P22692 258 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 RPL13P26373 211 aaKnown RBP14.37□□□□□ -0.11
CKAP2-202ENST00000378034 CYP2J2P51589 502 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 TMEM132DQ14C87 1099 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 SNRNP35Q16560 246 aaKnown RBP14.37□□□□□ -0.11
CKAP2-202ENST00000378034 EDRF1Q3B7T1 1238 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 TIGD5Q53EQ6 642 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 SMYD4Q8IYR2 804 aaPredicted RBP14.37□□□□□ -0.11
CKAP2-202ENST00000378034 DHTKD1Q96HY7 919 aaPredicted RBP14.37□□□□□ -0.11
CKAP2-202ENST00000378034 TLR9Q9NR96 1032 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 MARCH5Q9NX47 278 aa14.37□□□□□ -0.11
CKAP2-202ENST00000378034 PRG3Q9Y2Y8 225 aaPredicted RBP14.37□□□□□ -0.11
CKAP2-202ENST00000378034 EXOC3O60645 756 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 LRPAP1P30533 357 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 UPP1Q16831 310 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 ZCWPW2Q504Y3 356 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 SPATA1Q5VX52 437 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 JADE1Q6IE81 842 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 CENPPQ6IPU0 288 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 TMEM173Q86WV6 379 aaPredicted RBP14.36□□□□□ -0.11
CKAP2-202ENST00000378034 ZSWIM2Q8NEG5 633 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 BEST2Q8NFU1 509 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 NOC3LQ8WTT2 800 aaKnown RBP14.36□□□□□ -0.11
CKAP2-202ENST00000378034 CACTINQ8WUQ7 758 aaKnown RBP14.36□□□□□ -0.11
CKAP2-202ENST00000378034 NGRNQ9NPE2 291 aaKnown RBP14.36□□□□□ -0.11
CKAP2-202ENST00000378034 ADAM28Q9UKQ2 775 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 SZT2Q5T011 3432 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 PSMA7O14818 248 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 MAPK13O15264 365 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 TADA2AO75478 443 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 EFEMP2O95967 443 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 PAX3P23760 479 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 DNAJB1P25685 340 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 SOX4Q06945 474 aaPredicted RBP14.36□□□□□ -0.11
CKAP2-202ENST00000378034 ELAVL2Q12926 359 aaKnown RBP14.36□□□□□ -0.11
CKAP2-202ENST00000378034 CAMK1Q14012 370 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 CBWD2Q8IUF1 395 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 BCL7CQ8WUZ0 217 aaPredicted RBP14.36□□□□□ -0.11
CKAP2-202ENST00000378034 C18orf25Q96B23 403 aaPredicted RBP14.36□□□□□ -0.11
CKAP2-202ENST00000378034 TSG101Q99816 390 aa14.36□□□□□ -0.11
CKAP2-202ENST00000378034 PODXLO00592 558 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 FSCN2O14926 492 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 CLCNKBP51801 687 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 LRRC63Q05C16 580 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 FOXR2Q6PJQ5 311 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 RNF168Q8IYW5 571 aaPredicted RBP14.35□□□□□ -0.11
CKAP2-202ENST00000378034 PPP2R3CQ969Q6 453 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 MFSD14AQ96MC6 490 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 PAAF1Q9BRP4 392 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 SSX2IPQ9Y2D8 614 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 FRMD4BQ9Y2L6 1034 aa14.35□□□□□ -0.11
CKAP2-202ENST00000378034 SF3B1O75533 1304 aaKnown RBP eCLIP14.35□□□□□ -0.114e-6■■□□□ 13.4
CKAP2-202ENST00000378034 BIN1O00499 593 aa14.34□□□□□ -0.11
CKAP2-202ENST00000378034 TRAPPC3O43617 180 aa14.34□□□□□ -0.11
CKAP2-202ENST00000378034 B3GAT3O94766 335 aa14.34□□□□□ -0.11
CKAP2-202ENST00000378034 KIF4AO95239 1232 aa14.34□□□□□ -0.11
CKAP2-202ENST00000378034 SOD2P04179 222 aa14.34□□□□□ -0.11
CKAP2-202ENST00000378034 NFICP08651 508 aa14.34□□□□□ -0.11
CKAP2-202ENST00000378034 BMP6P22004 513 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms