RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 EEF1B2P24534 225 aaKnown RBP11.44□□□□□ -0.58
HIF3A-205ENST00000377670 EIF3BP55884 814 aaKnown RBP11.44□□□□□ -0.58
HIF3A-205ENST00000377670 GRAMD1BQ3KR37 738 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 CEP55Q53EZ4 464 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 CLEC17AQ6ZS10 378 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 NECAB2Q7Z6G3 386 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 PASD1Q8IV76 773 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 TRIM42Q8IWZ5 723 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 PARP9Q8IXQ6 854 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-205ENST00000377670 XXYLT1Q8NBI6 393 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 ENGASEQ8NFI3 743 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 SLITRK1Q96PX8 696 aa11.44□□□□□ -0.58
HIF3A-205ENST00000377670 MTG1Q9BT17 334 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-205ENST00000377670 DNAJC17Q9NVM6 304 aaKnown RBP11.44□□□□□ -0.58
HIF3A-205ENST00000377670 G3BP2Q9UN86 482 aaKnown RBP11.44□□□□□ -0.58
HIF3A-205ENST00000377670 TCRBV5S4A2TA0A5A2 114 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 KLRC2P26717 231 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 EFCAB12Q6NXP0 572 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 ZMAT2Q96NC0 199 aaKnown RBP11.43□□□□□ -0.58
HIF3A-205ENST00000377670 RTFDC1Q9BY42 306 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-205ENST00000377670 PRR23AA6NEV1 266 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 LRRC53A6NM62 1247 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 SYNCRIPO60506 623 aaKnown RBP11.43□□□□□ -0.58
HIF3A-205ENST00000377670 TOM1L1O75674 476 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 EEF1DP29692 281 aaKnown RBP11.43□□□□□ -0.58
HIF3A-205ENST00000377670 LRRC63Q05C16 580 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 GFPT1Q06210 699 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-205ENST00000377670 KCNH2Q12809 1159 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 IRAK1BP1Q5VVH5 260 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 NOTUMQ6P988 496 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 SZRD1Q7Z422 152 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 CCDC138Q96M89 665 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 UBR1Q8IWV7 1749 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 CAMTA1Q9Y6Y1 1673 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 MT-ND3P03897 115 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 DNAJB2P25686 324 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 BACE1P56817 501 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 C6orf118Q5T5N4 469 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 ZNF746Q6NUN9 644 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-205ENST00000377670 SARM1Q6SZW1 724 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 HIPK4Q8NE63 616 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 EXOC1LA0A1B0GW35 172 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 PLS3P13797 630 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 ST3GAL1Q11201 340 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 WASHC5Q12768 1159 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 STK4Q13043 487 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 TRIML2Q8N7C3 387 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 TMEM35BQ8NCS4 154 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 MUC3BQ9H195 1237 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 ZWILCHQ9H900 591 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 ACSL3O95573 720 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 YWHABP31946 246 aaKnown RBP11.43□□□□□ -0.58
HIF3A-205ENST00000377670 AP3M2P53677 418 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 CUL1Q13616 776 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 EFHC2Q5JST6 749 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 TRIM48Q8IWZ4 208 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 PCDHAC2Q9Y5I4 1007 aa11.43□□□□□ -0.58
HIF3A-205ENST00000377670 TTC26A0AVF1 554 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 TBKBP1A7MCY6 615 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 POLRMTO00411 1230 aaKnown RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 NKRFO15226 690 aaKnown RBP eCLIP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 CFLARO15519 480 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 ZBED1O96006 694 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 PGK2P07205 417 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 NCF2P19878 526 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 EPHA7Q15375 998 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 DUOXA2Q1HG44 320 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 SCFD1Q8WVM8 642 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 RBAKQ9NYW8 714 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 KLHL8Q9P2G9 620 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 TLK1Q9UKI8 766 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 TMEM247A6NEH6 219 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 PCSK1P29120 753 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 CAP2P40123 477 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 ADCY2Q08462 1091 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 TMEM132DQ14C87 1099 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 IRX2Q9BZI1 471 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 TRIM9Q9C026 710 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 ABHD10Q9NUJ1 306 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 AGO2Q9UKV8 859 aaKnown RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 UBE4BO95155 1302 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 GNGT2O14610 69 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 HOXA7P31268 230 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 SDC4P31431 198 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 RFC5P40937 340 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 ARHGEF7Q14155 803 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 OOSP2Q86WS3 158 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 PITPNM3Q9BZ71 974 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 ASNSD1Q9NWL6 643 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 PACSIN2Q9UNF0 486 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 FIS1Q9Y3D6 152 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 C3P01024 1663 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 LGALS16A8MUM7 142 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 SLC37A4O43826 429 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 LMNAP02545 664 aaKnown RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 SERPING1P05155 500 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 TBXAS1P24557 533 aaPredicted RBP11.42□□□□□ -0.58
HIF3A-205ENST00000377670 SV2CQ496J9 727 aa11.42□□□□□ -0.58
HIF3A-205ENST00000377670 TMEM143Q96AN5 459 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms