RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 FAM129AQ9BZQ8 928 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 CTTNBP2NLQ9P2B4 639 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 CLRN2A0PK11 232 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 TBX3O15119 743 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 ASAP2O43150 1006 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 ECE1P42892 770 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 ERVK-9P63128 1117 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 SUPT20HQ8NEM7 779 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 MAK16Q9BXY0 300 aaKnown RBP16.51■□□□□ 0.23
FXN-201ENST00000377270 ARHGEF3Q9NR81 526 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 CTNNAL1Q9UBT7 734 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 RASAL2Q9UJF2 1139 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 DNM3Q9UQ16 869 aa16.51■□□□□ 0.23
FXN-201ENST00000377270 DCDC2CA8MYV0 355 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 ZNF76P36508 570 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 SH3BGRP55822 239 aaPredicted RBP16.5■□□□□ 0.23
FXN-201ENST00000377270 PDE1BQ01064 536 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 KCNMA1Q12791 1236 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 MTMR3Q13615 1198 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 C6orf183Q5T699 404 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 NEPROQ6NW34 567 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 BTNL9Q6UXG8 535 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 CAPN12Q6ZSI9 719 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 SYT2Q8N9I0 419 aaPredicted RBP16.5■□□□□ 0.23
FXN-201ENST00000377270 CYP2W1Q8TAV3 490 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 GDAP1Q8TB36 358 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 CEP63Q96MT8 703 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 MIS12Q9H081 205 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 NRDE2Q9H7Z3 1164 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 TMOD2Q9NZR1 351 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 GGT7Q9UJ14 662 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 TDRKHQ9Y2W6 561 aaKnown RBP16.5■□□□□ 0.23
FXN-201ENST00000377270 TSC22D4Q9Y3Q8 395 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 WDR46O15213 610 aaKnown RBP16.5■□□□□ 0.23
FXN-201ENST00000377270 MSH4O15457 936 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
FXN-201ENST00000377270 TPBGLP0DKB5 382 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 SPATA31C1P0DKV0 1188 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 RPA1P27694 616 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 GALK1P51570 392 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 RASSF7Q02833 373 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 PIGWQ7Z7B1 504 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 BPHLQ86WA6 291 aaPredicted RBP16.5■□□□□ 0.23
FXN-201ENST00000377270 UBLCP1Q8WVY7 318 aaPredicted RBP16.5■□□□□ 0.23
FXN-201ENST00000377270 BAP1Q92560 729 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 MAELQ96JY0 434 aaKnown RBP16.5■□□□□ 0.23
FXN-201ENST00000377270 SPATA17Q96L03 361 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 FAM20AQ96MK3 541 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 ZNF317Q96PQ6 595 aaPredicted RBP16.5■□□□□ 0.23
FXN-201ENST00000377270 SSX2IPQ9Y2D8 614 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 LRCH1Q9Y2L9 728 aa16.5■□□□□ 0.23
FXN-201ENST00000377270 KDM1AO60341 852 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 TJP3O95049 919 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 IGBP1P78318 339 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 KLHL7Q8IXQ5 586 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.49■□□□□ 0.23
FXN-201ENST00000377270 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 ASAP3Q8TDY4 903 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 CCT7Q99832 543 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 KCTD10Q9H3F6 313 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 QPCTLQ9NXS2 382 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 DKK3Q9UBP4 350 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 HERC5Q9UII4 1024 aaKnown RBP16.49■□□□□ 0.23
FXN-201ENST00000377270 FBXL5Q9UKA1 691 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 BIRC5O15392 142 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 PTDSS1P48651 473 aaKnown RBP16.49■□□□□ 0.23
FXN-201ENST00000377270 DNA2P51530 1060 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 STAT2P52630 851 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 GIT2Q14161 759 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 KIAA1755Q5JYT7 1200 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 MDM1Q8TC05 714 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 STK32AQ8WU08 396 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 INPP4AQ96PE3 977 aaPredicted RBP16.49■□□□□ 0.23
FXN-201ENST00000377270 HNRNPABQ99729 332 aaKnown RBP16.49■□□□□ 0.23
FXN-201ENST00000377270 NLRC4Q9NPP4 1024 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 TTLL3Q9Y4R7 772 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 ZNF646O15015 1829 aaPredicted RBP16.49■□□□□ 0.23
FXN-201ENST00000377270 ATP9AO75110 1047 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 RAD17O75943 681 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 CIITAP33076 1130 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 PLS1Q14651 629 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 CCSAPQ6IQ19 270 aaPredicted RBP16.49■□□□□ 0.23
FXN-201ENST00000377270 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 NAP1L3Q99457 506 aaPredicted RBP16.49■□□□□ 0.23
FXN-201ENST00000377270 RAB17Q9H0T7 212 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 AASDHPPTQ9NRN7 309 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 TRIM33Q9UPN9 1127 aa16.49■□□□□ 0.23
FXN-201ENST00000377270 SPDYE2BA6NHP3 402 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 SPDYE6P0CI01 402 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 ZNF131P52739 623 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 TTLL12Q14166 644 aaPredicted RBP16.48■□□□□ 0.23
FXN-201ENST00000377270 SLC15A2Q16348 729 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 KRT71Q3SY84 523 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 PDXDC1Q6P996 788 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 RBBP8NLQ8NC74 664 aaPredicted RBP16.48■□□□□ 0.23
FXN-201ENST00000377270 MRPL46Q9H2W6 279 aaKnown RBP16.48■□□□□ 0.23
FXN-201ENST00000377270 SAMD15Q9P1V8 674 aa16.48■□□□□ 0.23
FXN-201ENST00000377270 PEX11AO75192 247 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms