RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 MTM1Q13496 603 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 TMEM119Q4V9L6 283 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 YY1AP1Q9H869 796 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 GEMIN8Q9NWZ8 242 aaKnown RBP17.79■□□□□ 0.44
VARS-215ENST00000375663 NDE1Q9NXR1 346 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 PSMC3IPQ9P2W1 217 aaPredicted RBP17.79■□□□□ 0.44
VARS-215ENST00000375663 EPS15L1Q9UBC2 864 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 PFDN1O60925 122 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 HNRNPH3P31942 346 aaKnown RBP17.79■□□□□ 0.44
VARS-215ENST00000375663 KLC1Q07866 573 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 MAPK6Q16659 721 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 HHIPL2Q6UWX4 724 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 BAP1Q92560 729 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 FAF1Q9UNN5 650 aaPredicted RBP17.79■□□□□ 0.44
VARS-215ENST00000375663 TRAF3IP3Q9Y228 551 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 CSADQ9Y600 493 aa17.79■□□□□ 0.44
VARS-215ENST00000375663 HNRNPCL1O60812 293 aaKnown RBP17.78■□□□□ 0.44
VARS-215ENST00000375663 GSTA1P08263 222 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 ACOT2P49753 483 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 NOP14P78316 857 aaKnown RBP17.78■□□□□ 0.44
VARS-215ENST00000375663 PIP4K2CQ8TBX8 421 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 SLC35C1Q96A29 364 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 KLF6Q99612 283 aaPredicted RBP17.78■□□□□ 0.44
VARS-215ENST00000375663 PI4K2AQ9BTU6 479 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 TMEM8AQ9HCN3 771 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 AKT3Q9Y243 479 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 TRAPPC3O43617 180 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 SGPL1O95470 568 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 ANP32DO95626 131 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.78■□□□□ 0.44
VARS-215ENST00000375663 NT5DC3Q86UY8 548 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 NSUN6Q8TEA1 469 aaKnown RBP17.78■□□□□ 0.44
VARS-215ENST00000375663 TSSK1BQ9BXA7 367 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 CCDC22O60826 627 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 GSTA2P09210 222 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 SLC20A1Q8WUM9 679 aa17.78■□□□□ 0.44
VARS-215ENST00000375663 AP2B1P63010 937 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 CRAMP1Q96RY5 1269 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 RIT2Q99578 217 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 SENP7Q9BQF6 1050 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 TIPINQ9BVW5 301 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 APOL6Q9BWW8 343 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 CYP26B1Q9NR63 512 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 C3P01024 1663 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 BCAR1P56945 870 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 IFRD2Q12894 506 aaPredicted RBP17.77■□□□□ 0.44
VARS-215ENST00000375663 TNFRSF25Q93038 417 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 SERPINI1Q99574 410 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 MYO3BQ8WXR4 1341 aa17.77■□□□□ 0.44
VARS-215ENST00000375663 HSPA4LO95757 839 aa17.77■□□□□ 0.43
VARS-215ENST00000375663 TNFRSF8P28908 595 aa17.77■□□□□ 0.43
VARS-215ENST00000375663 ART3Q13508 389 aa17.77■□□□□ 0.43
VARS-215ENST00000375663 RIBC1Q8N443 379 aaPredicted RBP17.77■□□□□ 0.43
VARS-215ENST00000375663 MTMR9Q96QG7 549 aa17.77■□□□□ 0.43
VARS-215ENST00000375663 KCNMA1Q12791 1236 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 PLA2G4FQ68DD2 849 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 LVRNQ6Q4G3 990 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 LRGUKQ96M69 825 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 PFDN4Q9NQP4 134 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 EIF3EP60228 445 aaKnown RBP17.76■□□□□ 0.43
VARS-215ENST00000375663 ROR1Q01973 937 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 CENPCQ03188 943 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 KDSRQ06136 332 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 GADL1Q6ZQY3 521 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 EIF1ADQ8N9N8 165 aaKnown RBP17.76■□□□□ 0.43
VARS-215ENST00000375663 ALKBH8Q96BT7 664 aaKnown RBP17.76■□□□□ 0.43
VARS-215ENST00000375663 CBWD1Q9BRT8 395 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 WWP1Q9H0M0 922 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 GZMAP12544 262 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 SREBF1P36956 1147 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 CDH6P55285 790 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 IFI35P80217 286 aaPredicted RBP17.76■□□□□ 0.43
VARS-215ENST00000375663 SPOPLQ6IQ16 392 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 ACAD10Q6JQN1 1059 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 CD302Q8IX05 232 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 MREGQ8N565 214 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 RBBP8NLQ8NC74 664 aaPredicted RBP17.76■□□□□ 0.43
VARS-215ENST00000375663 MED15Q96RN5 788 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 PPP1R16BQ96T49 567 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 RANBP17Q9H2T7 1088 aaKnown RBP17.76■□□□□ 0.43
VARS-215ENST00000375663 THEGQ9P2T0 379 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 KRT3P12035 628 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 CNGA1P29973 690 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 LRRC23Q53EV4 343 aaPredicted RBP17.76■□□□□ 0.43
VARS-215ENST00000375663 FUKQ8N0W3 1084 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 CNPY4Q8N129 248 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 DNAJC9Q8WXX5 260 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 CCDC124Q96CT7 223 aaKnown RBP17.76■□□□□ 0.43
VARS-215ENST00000375663 VPS11Q9H270 941 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 CYP4F11Q9HBI6 524 aa17.76■□□□□ 0.43
VARS-215ENST00000375663 ATRNO75882 1429 aa17.75■□□□□ 0.43
VARS-215ENST00000375663 TARSP26639 723 aaKnown RBP17.75■□□□□ 0.43
VARS-215ENST00000375663 EVX2Q03828 476 aa17.75■□□□□ 0.43
VARS-215ENST00000375663 SNRNP48Q6IEG0 339 aaKnown RBP17.75■□□□□ 0.43
VARS-215ENST00000375663 RGS9BPQ6ZS82 235 aa17.75■□□□□ 0.43
VARS-215ENST00000375663 C3orf62Q6ZUJ4 267 aa17.75■□□□□ 0.43
VARS-215ENST00000375663 ZNF720Q7Z2F6 126 aa17.75■□□□□ 0.43
VARS-215ENST00000375663 KIRREL3Q8IZU9 778 aa17.75■□□□□ 0.43
VARS-215ENST00000375663 ZNF277Q9NRM2 450 aaPredicted RBP17.75■□□□□ 0.43
VARS-215ENST00000375663 TRPC5Q9UL62 973 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms